Gene detail

Detail information of GWHGAAZE023144

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	KDP27679.1	3.30347E-57	hypothetical protein JCGZ_20099 [Jatropha curcas]
Swissprot	tr\|Q9FID9\|Y5389_ARATH	8E-35	Probable receptor-like protein kinase At5g38990 (Precursor)
trEMBL	tr\|A0A067K7A1\|A0A067K7A1_JATCU	1E-57	Uncharacterized protein {ECO:0000313\|EMBL:KDP27679.1}
TAIR10	AT5G38990.1	4E-32	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	478085	479905	-
GWHAAZE00000007	mRNA	478085	479905	-
GWHAAZE00000007	exon	478085	478389	-
GWHAAZE00000007	exon	478622	479041	-
GWHAAZE00000007	exon	479728	479905	-
GWHAAZE00000007	CDS	479728	479905	-
GWHAAZE00000007	CDS	478622	479041	-
GWHAAZE00000007	CDS	478085	478389	-

Transcript Sequence
>GWHTAAZE023174 ATGGCACGGACACTACACCCGACACGTGCAAGCCAACTTCCTACTCGGAGTATTTCAAGAAGGCATGCCCACAGGCTTACAGATACTTCTTTGATAACGAGACCAGCACCTTTAGCTGTACCGGTGCGAATTGCGGATTACCGAATCACCTTTTGCCCATCCGTAATAGACGAATCTGTTCTCGGTGGAGAAAAAGCAACACTCTCAATTTTGAGTTACGTGGTTTTTTGGCGATGGCGGAAAGTTGGTTTAACCGACACCAAATTCGACCTAAGTGGGTCCAAGTTAAGCGCTTCATTCCTACCATCAGATATTCGGCGCTTTTCACTTGCTGAAATCAAATATGGTACTAACAACTTCGACGACAATCTTGTGATAGGCATTGAAGGATTTAGCAACGTGTATAAAGGCTATATAGACAACGGTGCAACCACTGTGGCAATCAAACAATTAAACGCTCTTTCTAATCAAAGTATTCGTGAGTTCGAAACAGAGATCAAAATGCTATCCAAACTATGGCATCTTCATCTTGTGTCCTTAATTGGATGCTGTGAGGATAATGGGGAAATGGTATTGGTGTTTGATTATATGGCTAATGGTAGTTTCGGGTACTTGGACCCAGAGTACTATCGACTACAAAGATTGATAGATAAGTCTGATGTGTACTCGTTCGGTGTGGTGTTATTCGAGGTGTTGTCTGGTAAGCCAGCAATTATTCATGACATACCGGAGGAGCTAGTGAATTTGGCTGAGTGGGCTCGGTGTTGTTATAAAACGGGGGCCCTTGATGAAATTATTGATCTTCATATACGGGACAAGATTGCACCAGGTTGTCTAAAAAAATTTGCCAATGTAGCTAATAGGCATCCAAGAACAAGGGATCAATCGTCCGTCGATGAGTGA

Network for GWHGAAZE023144

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07714.18	PK_Tyr_Ser-Thr	126	202	1.70E-12

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.059
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	0.000
	SRR3591711	White flower	0.000
	SRR3591712	Green floral bud	0.000
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.000
	SRR8316896	Juvenile bud stage	0.011
	SRR8316897	Juvenile bud stage	0.000
	SRR8316894	Third green stage	0.000
	SRR8316900	Third green stage	0.000
	SRR8316901	Third green stage	0.039
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.000
	SRR8316903	Complete white stage	0.009
	SRR8316902	Silver flowering stage	0.027
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.001
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.035
SRP132670	SRR6706286	Control	0.000
	SRR6706287	Light intensity 50%	0.000
	SRR6706288	Light intensity 20%	0.014
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.000
	CNS0095593	Slightly white alabastrum(diploid) 2	0.000
	CNS0095594	Slightly white alabastrum(diploid) 3	0.000
	CNS0095595	Whole white alabastrum(diploid) 2	0.000
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.000
	CNS0095598	Silvery flower (diploied) 1	0.000
	CNS0095599	Silvery flower (diploied) 2	0.098
	CNS0095600	Silvery flower (diploied) 3	0.000
	CNS0095601	Golden flower (diploid) 1	0.000
	CNS0095602	Golden flower (diploid) 2	0.074
	CNS0095603	Golden flower (diploid) 3	0.168
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.000
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.000
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.000
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.000
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.000
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	0.000
	CNS0095612	Silvery flower (tetraploid) 3	0.000
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.000
	CRR073298	Stem 2	0.006
	CRR073299	Stem 3	0.000
	CRR073300	Leaf 1	0.004
	CRR073301	Leaf 2	0.000
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.004
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.011
	CRR073306	Third green 1	0.010
	CRR073307	Third green 2	0.003
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.222
	CRR073310	Second white 2	0.033
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.098
	CRR073313	Silver flowering 2	0.026
	CRR073314	Silver flowering 3	0.034
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.058
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000