Gene detail

Detail information of GWHGAAZE022965

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011086646.1	2.23249E-72	PREDICTED: ethylene-responsive transcription factor ESR2-like [Sesamum indicum]
Swissprot	tr\|Q9FYK5\|ESR2_ARATH	1E-44	Ethylene-responsive transcription factor ESR2
trEMBL	tr\|A0A067JS36\|A0A067JS36_JATCU	2E-72	Uncharacterized protein {ECO:0000313\|EMBL:KDP26697.1}
TAIR10	AT1G24590.1	2E-18	DORNROSCHEN-like

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000006	gene	81310388	81311395	+
GWHAAZE00000006	mRNA	81310388	81311395	+
GWHAAZE00000006	exon	81310388	81311395	+
GWHAAZE00000006	CDS	81310388	81311395	+

Transcript Sequence
>GWHTAAZE022995 ACCACCACCACCAACACCAACAAGAGGCCGCTAAAAGACGGCTCCACCACGGCCGGCAACATGAGATACCGCGGAGTACGCCGCCGCCCTTGGGGCCGTTACGCGGCTGAGATTAGGGACCCACAGTCGAAAGAGAGGCGTTGGCTAGGCACCTTCGACACCGCCGAGGAGGCGGCGTGCGCGTACGACTGTGCCGCACGCGCCATGCGCGGTTCCAAGGCGAGAACTAATTTCGTGTATCCAATCCCACCTACTCACGCTGTTACCGAGAATCTCAACCCTCCCCCGTTCAACTACGGAAAACGATCTCATCCGTCCCTTAGGGACATACCCTCCCCCTCATACCAGTTTGTGCAACCGTCCAGCTTCTCCTCGAGTCCGCAGGTTGCTGATTTATCTGGGTCCCAGTACTCTCAACCGCAGAGAACAAATCCCCTTAACATGCTCCTCTTTCGTGACCTTCTCAACTCTTCCAGTGCAATGTCCGCTTGTACCACTCCCTACTTTAACGAACACAACAACACTGCATACCTGAACGACTCTACTTACAGTGCAGTGCAAACGGTGAACCAATCAAACATTAACACGTGTTCCGGATTTACATCGTCTGCGAGTCTGCTAAAGTTTGATCATGATAACCATCAAACTAATGCCGCTGATAATATGCCAATGGACTTCTTTCAATCAGAGAGCTCGGATTCAGGTTTATTGCAGGAGGTACTAAACGGATTTTTCCCAAAACCTGAAGTGGTGAATTCAGAAAGCATCAATGTTGAATCATTGCCTGAATTTTCATCAGGACAACAAACGTTTGATGAAATGTCAAAGGGAATTGAAGACGATCAGTTTGGTCGTCTCTATTTGGACTATCAGCATCCGCAGGGCGTTATTCCACAGCAGTTTGGGGAGTACAACGAGATGCCGGCGTCTCAGGAGGATGTGTTTGGTGATATTTTTCAGTATCCAGAACTTGTCGGTGTTTTTGCTGCTAAAATGCAAAATGCTTGA

Network for GWHGAAZE022965

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00847.21	AP2	22	71	2.80E-12

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	AP2/ERF-ERF

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006355	biological_process	regulation of transcription, DNA-templated
GO:0003700	molecular_function	DNA-binding transcription factor activity
GO:0003677	molecular_function	DNA binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.529
	SRR3591709	Stem	0.085
	SRR3591710	White floral bud	0.580
	SRR3591711	White flower	0.147
	SRR3591712	Green floral bud	0.141
	SRR3591713	Yellow flower	0.112
SRP173429	SRR8316895	Juvenile bud stage	0.196
	SRR8316896	Juvenile bud stage	0.207
	SRR8316897	Juvenile bud stage	0.232
	SRR8316894	Third green stage	0.134
	SRR8316900	Third green stage	0.308
	SRR8316901	Third green stage	0.371
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.731
	SRR8316903	Complete white stage	0.466
	SRR8316902	Silver flowering stage	0.070
	SRR8316904	Silver flowering stage	0.111
	SRR8316905	Silver flowering stage	0.068
	SRR8316906	Gold flowering stage	0.040
	SRR8316907	Gold flowering stage	0.347
	SRR8316908	Gold flowering stage	0.050
SRP132670	SRR6706286	Control	0.220
	SRR6706287	Light intensity 50%	0.146
	SRR6706288	Light intensity 20%	0.125
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	3.588
	CNS0095593	Slightly white alabastrum(diploid) 2	2.349
	CNS0095594	Slightly white alabastrum(diploid) 3	1.106
	CNS0095595	Whole white alabastrum(diploid) 2	1.601
	CNS0095596	Whole white alabastrum(diploid) 3	1.065
	CNS0095597	Whole white alabastrum(diploid) 4	1.050
	CNS0095598	Silvery flower (diploied) 1	0.546
	CNS0095599	Silvery flower (diploied) 2	0.592
	CNS0095600	Silvery flower (diploied) 3	0.540
	CNS0095601	Golden flower (diploid) 1	0.391
	CNS0095602	Golden flower (diploid) 2	0.368
	CNS0095603	Golden flower (diploid) 3	0.470
	CNS0095604	Slightly white alabastrum(tetraploid) 1	1.129
	CNS0095605	Slightly white alabastrum(tetraploid) 2	1.654
	CNS0095606	Slightly white alabastrum(tetraploid) 3	1.964
	CNS0095607	Whole white alabastrum(tetraploid) 1	1.581
	CNS0095608	Whole white alabastrum(tetraploid) 2	1.956
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.116
	CNS0095610	Silvery flower (tetraploid) 1	0.191
	CNS0095611	Silvery flower (tetraploid) 2	0.060
	CNS0095612	Silvery flower (tetraploid) 3	0.068
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.105
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	3.813
	CRR073298	Stem 2	3.794
	CRR073299	Stem 3	1.015
	CRR073300	Leaf 1	2.611
	CRR073301	Leaf 2	4.295
	CRR073302	Leaf 3	1.088
	CRR073303	Juvenile bud 1	1.555
	CRR073304	Juvenile bud 2	0.217
	CRR073305	Juvenile bud 3	2.216
	CRR073306	Third green 1	1.036
	CRR073307	Third green 2	0.671
	CRR073308	Third green 3	0.376
	CRR073309	Second white 1	0.779
	CRR073310	Second white 2	0.172
	CRR073311	Second white 3	0.343
	CRR073312	Silver flowering 1	0.047
	CRR073313	Silver flowering 2	0.122
	CRR073314	Silver flowering 3	0.100
	CRR073315	Gold flowering 1	0.044
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.084
	CRR073318	Tawny withering 1	0.104
	CRR073319	Tawny withering 2	0.023
	CRR073320	Tawny withering 3	0.000