Detail information of GWHGAAZE022835


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_003631281.10PREDICTED: probable receptor-like protein kinase At5g15080 [Vitis vinifera]
COGYP_828710.18E-23serine/threonine protein kinase
Swissprottr|Q9LFP7|Y5158_ARATH0Probable receptor-like protein kinase At5g15080
trEMBLtr|D7TNE7|D7TNE7_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI32020.3}
TAIR10AT5G15080.10Protein kinase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene7940784779412193-
GWHAAZE00000006mRNA7940784779412193-
GWHAAZE00000006exon7941200479412193-
GWHAAZE00000006exon7941028379410617-
GWHAAZE00000006exon7940959679409731-
GWHAAZE00000006exon7940928079409416-
GWHAAZE00000006exon7940906979409192-
GWHAAZE00000006exon7940784779408370-
GWHAAZE00000006CDS7941200479412193-
GWHAAZE00000006CDS7941028379410617-
GWHAAZE00000006CDS7940959679409731-
GWHAAZE00000006CDS7940928079409416-
GWHAAZE00000006CDS7940906979409192-
GWHAAZE00000006CDS7940784779408370-
Transcript Sequence

Network for GWHGAAZE022835

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.18PK_Tyr_Ser-Thr1274039.30E-46
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_RLCK-VIIa-2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf24.233
SRR3591706second leaf19.536
SRR3591707mature leaf37.175
SRR3591708Shoot apex30.775
SRR3591709Stem44.938
SRR3591710White floral bud19.465
SRR3591711White flower35.028
SRR3591712Green floral bud16.656
SRR3591713Yellow flower37.181
SRP173429 SRR8316895Juvenile bud stage 8.938
SRR8316896Juvenile bud stage 12.842
SRR8316897Juvenile bud stage 4.893
SRR8316894Third green stage 5.950
SRR8316900Third green stage 12.629
SRR8316901Third green stage 11.754
SRR8316898Complete white stage 4.079
SRR8316899Complete white stage 18.254
SRR8316903Complete white stage 7.867
SRR8316902Silver flowering stage7.400
SRR8316904Silver flowering stage11.100
SRR8316905Silver flowering stage5.654
SRR8316906Gold flowering stage 24.773
SRR8316907Gold flowering stage 23.271
SRR8316908Gold flowering stage 26.921
SRP132670SRR6706286Control11.309
SRR6706287Light intensity 50%10.590
SRR6706288Light intensity 20%10.519
CNP0000432CNS0095592Slightly white alabastrum(diploid) 111.807
CNS0095593Slightly white alabastrum(diploid) 29.630
CNS0095594Slightly white alabastrum(diploid) 39.231
CNS0095595Whole white alabastrum(diploid) 29.129
CNS0095596Whole white alabastrum(diploid) 35.127
CNS0095597Whole white alabastrum(diploid) 47.065
CNS0095598Silvery flower (diploied) 117.503
CNS0095599Silvery flower (diploied) 214.287
CNS0095600Silvery flower (diploied) 314.670
CNS0095601Golden flower (diploid) 116.086
CNS0095602Golden flower (diploid) 223.797
CNS0095603Golden flower (diploid) 324.312
CNS0095604Slightly white alabastrum(tetraploid) 110.743
CNS0095605Slightly white alabastrum(tetraploid) 211.653
CNS0095606Slightly white alabastrum(tetraploid) 315.044
CNS0095607Whole white alabastrum(tetraploid) 19.307
CNS0095608Whole white alabastrum(tetraploid) 25.110
CNS0095609Whole white alabastrum(tetraploid) 39.105
CNS0095610Silvery flower (tetraploid) 119.481
CNS0095611Silvery flower (tetraploid) 216.537
CNS0095612Silvery flower (tetraploid) 315.155
CNS0095613Golden flower (tetraploid) 116.026
CNS0095614Golden flower (tetraploid) 220.230
CNS0095615Golden flower (tetraploid) 331.226
CRA001975CRR073297Stem 120.562
CRR073298Stem 216.503
CRR073299Stem 318.560
CRR073300Leaf 114.023
CRR073301Leaf 216.359
CRR073302Leaf 313.467
CRR073303Juvenile bud 116.167
CRR073304Juvenile bud 212.162
CRR073305Juvenile bud 319.366
CRR073306Third green 113.917
CRR073307Third green 210.460
CRR073308Third green 314.635
CRR073309Second white 116.455
CRR073310Second white 215.648
CRR073311Second white 316.100
CRR073312Silver flowering 125.222
CRR073313Silver flowering 219.778
CRR073314Silver flowering 317.832
CRR073315Gold flowering 127.722
CRR073316Gold flowering 236.040
CRR073317Gold flowering 326.693
CRR073318Tawny withering 135.939
CRR073319Tawny withering 232.828
CRR073320Tawny withering 341.065