Detail information of GWHGAAZE022691


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002277905.10PREDICTED: proline-rich receptor-like protein kinase PERK9 [Vitis vinifera]
COGYP_001958461.16E-31hypothetical protein Aasi_1443
Swissprottr|Q9C660|PEK10_ARATH0Proline-rich receptor-like protein kinase PERK10
trEMBLtr|D7T9E0|D7T9E0_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI27111.3}
TAIR10AT1G26150.18E-176proline-rich extensin-like receptor kinase 10

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene7698025676983434-
GWHAAZE00000006mRNA7698025676983434-
GWHAAZE00000006exon7698025676980416-
GWHAAZE00000006exon7698136476981526-
GWHAAZE00000006exon7698174176981902-
GWHAAZE00000006exon7698199276982139-
GWHAAZE00000006exon7698227576982351-
GWHAAZE00000006exon7698245076982520-
GWHAAZE00000006exon7698260976982695-
GWHAAZE00000006exon7698279676983225-
GWHAAZE00000006exon7698332576983434-
GWHAAZE00000006five_prime_UTR7698337376983434-
GWHAAZE00000006CDS7698332576983372-
GWHAAZE00000006CDS7698279676983225-
GWHAAZE00000006CDS7698260976982695-
GWHAAZE00000006CDS7698245076982520-
GWHAAZE00000006CDS7698227576982351-
GWHAAZE00000006CDS7698199276982139-
GWHAAZE00000006CDS7698174176981902-
GWHAAZE00000006CDS7698136476981526-
GWHAAZE00000006CDS7698025676980416-
Transcript Sequence

Network for GWHGAAZE022691

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase743438.70E-45
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_PERK-1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0005524molecular_functionATP binding
GO:0004672molecular_functionprotein kinase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf13.093
SRR3591706second leaf7.657
SRR3591707mature leaf4.996
SRR3591708Shoot apex12.176
SRR3591709Stem19.065
SRR3591710White floral bud7.830
SRR3591711White flower7.539
SRR3591712Green floral bud4.735
SRR3591713Yellow flower2.493
SRP173429 SRR8316895Juvenile bud stage 18.620
SRR8316896Juvenile bud stage 20.823
SRR8316897Juvenile bud stage 11.583
SRR8316894Third green stage 4.526
SRR8316900Third green stage 8.259
SRR8316901Third green stage 12.537
SRR8316898Complete white stage 1.906
SRR8316899Complete white stage 17.825
SRR8316903Complete white stage 10.113
SRR8316902Silver flowering stage3.401
SRR8316904Silver flowering stage6.889
SRR8316905Silver flowering stage1.452
SRR8316906Gold flowering stage 6.424
SRR8316907Gold flowering stage 4.476
SRR8316908Gold flowering stage 6.179
SRP132670SRR6706286Control4.799
SRR6706287Light intensity 50%6.225
SRR6706288Light intensity 20%5.672
CNP0000432CNS0095592Slightly white alabastrum(diploid) 118.286
CNS0095593Slightly white alabastrum(diploid) 225.549
CNS0095594Slightly white alabastrum(diploid) 321.174
CNS0095595Whole white alabastrum(diploid) 219.035
CNS0095596Whole white alabastrum(diploid) 35.352
CNS0095597Whole white alabastrum(diploid) 49.799
CNS0095598Silvery flower (diploied) 132.575
CNS0095599Silvery flower (diploied) 236.160
CNS0095600Silvery flower (diploied) 313.116
CNS0095601Golden flower (diploid) 140.784
CNS0095602Golden flower (diploid) 222.292
CNS0095603Golden flower (diploid) 318.510
CNS0095604Slightly white alabastrum(tetraploid) 18.395
CNS0095605Slightly white alabastrum(tetraploid) 27.902
CNS0095606Slightly white alabastrum(tetraploid) 314.967
CNS0095607Whole white alabastrum(tetraploid) 14.631
CNS0095608Whole white alabastrum(tetraploid) 23.513
CNS0095609Whole white alabastrum(tetraploid) 36.461
CNS0095610Silvery flower (tetraploid) 112.319
CNS0095611Silvery flower (tetraploid) 25.137
CNS0095612Silvery flower (tetraploid) 36.185
CNS0095613Golden flower (tetraploid) 12.959
CNS0095614Golden flower (tetraploid) 26.162
CNS0095615Golden flower (tetraploid) 33.691
CRA001975CRR073297Stem 18.614
CRR073298Stem 28.136
CRR073299Stem 34.224
CRR073300Leaf 19.482
CRR073301Leaf 211.848
CRR073302Leaf 34.319
CRR073303Juvenile bud 15.815
CRR073304Juvenile bud 21.840
CRR073305Juvenile bud 38.645
CRR073306Third green 16.694
CRR073307Third green 26.862
CRR073308Third green 39.741
CRR073309Second white 13.117
CRR073310Second white 24.124
CRR073311Second white 34.945
CRR073312Silver flowering 15.590
CRR073313Silver flowering 23.779
CRR073314Silver flowering 39.325
CRR073315Gold flowering 12.056
CRR073316Gold flowering 26.638
CRR073317Gold flowering 31.829
CRR073318Tawny withering 115.947
CRR073319Tawny withering 234.195
CRR073320Tawny withering 322.690