Detail information of GWHGAAZE022608


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007227707.11.4222E-173hypothetical protein PRUPE_ppa008175mg [Prunus persica]
COGYP_001356881.10.0000002PAP2 family phosphoesterase
Swissprottr|Q8LFD1|LPP3_ARATH9E-154Putative lipid phosphate phosphatase 3, chloroplastic (Precursor)
trEMBLtr|M5XTP5|M5XTP5_PRUPE5E-174Uncharacterized protein {ECO:0000313|EMBL:EMJ28906.1}
TAIR10AT3G02600.52E-112lipid phosphate phosphatase 3

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene7527460875276628-
GWHAAZE00000006mRNA7527460875276628-
GWHAAZE00000006exon7527460875274822-
GWHAAZE00000006exon7527490275274961-
GWHAAZE00000006exon7527511075275298-
GWHAAZE00000006exon7527545975275549-
GWHAAZE00000006exon7527598375276092-
GWHAAZE00000006exon7527619675276283-
GWHAAZE00000006exon7527641375276628-
GWHAAZE00000006CDS7527641375276628-
GWHAAZE00000006CDS7527619675276283-
GWHAAZE00000006CDS7527598375276092-
GWHAAZE00000006CDS7527545975275549-
GWHAAZE00000006CDS7527511075275298-
GWHAAZE00000006CDS7527490275274961-
GWHAAZE00000006CDS7527460875274822-
Transcript Sequence

Network for GWHGAAZE022608

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01569.22PAP21012443.40E-31
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K18693DPP1, DPPL, PLPP4_5 Biosynthesis of secondary metabolites map01110
Glycerolipid metabolismmap00561
Glycerophospholipid metabolismmap00564

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf7.313
SRR3591706second leaf6.139
SRR3591707mature leaf13.536
SRR3591708Shoot apex5.464
SRR3591709Stem3.990
SRR3591710White floral bud1.605
SRR3591711White flower1.592
SRR3591712Green floral bud1.886
SRR3591713Yellow flower0.885
SRP173429 SRR8316895Juvenile bud stage 6.670
SRR8316896Juvenile bud stage 9.773
SRR8316897Juvenile bud stage 2.599
SRR8316894Third green stage 2.730
SRR8316900Third green stage 3.958
SRR8316901Third green stage 4.804
SRR8316898Complete white stage 1.274
SRR8316899Complete white stage 8.087
SRR8316903Complete white stage 2.323
SRR8316902Silver flowering stage0.848
SRR8316904Silver flowering stage1.335
SRR8316905Silver flowering stage0.680
SRR8316906Gold flowering stage 2.198
SRR8316907Gold flowering stage 1.571
SRR8316908Gold flowering stage 7.020
SRP132670SRR6706286Control6.019
SRR6706287Light intensity 50%5.733
SRR6706288Light intensity 20%5.146
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.744
CNS0095593Slightly white alabastrum(diploid) 210.304
CNS0095594Slightly white alabastrum(diploid) 39.607
CNS0095595Whole white alabastrum(diploid) 29.097
CNS0095596Whole white alabastrum(diploid) 35.345
CNS0095597Whole white alabastrum(diploid) 45.738
CNS0095598Silvery flower (diploied) 19.033
CNS0095599Silvery flower (diploied) 27.246
CNS0095600Silvery flower (diploied) 32.366
CNS0095601Golden flower (diploid) 17.976
CNS0095602Golden flower (diploid) 24.307
CNS0095603Golden flower (diploid) 34.750
CNS0095604Slightly white alabastrum(tetraploid) 12.648
CNS0095605Slightly white alabastrum(tetraploid) 23.022
CNS0095606Slightly white alabastrum(tetraploid) 33.212
CNS0095607Whole white alabastrum(tetraploid) 12.272
CNS0095608Whole white alabastrum(tetraploid) 21.874
CNS0095609Whole white alabastrum(tetraploid) 31.793
CNS0095610Silvery flower (tetraploid) 11.600
CNS0095611Silvery flower (tetraploid) 20.789
CNS0095612Silvery flower (tetraploid) 30.782
CNS0095613Golden flower (tetraploid) 11.490
CNS0095614Golden flower (tetraploid) 21.977
CNS0095615Golden flower (tetraploid) 30.335
CRA001975CRR073297Stem 13.990
CRR073298Stem 22.578
CRR073299Stem 31.947
CRR073300Leaf 15.721
CRR073301Leaf 24.248
CRR073302Leaf 31.885
CRR073303Juvenile bud 13.175
CRR073304Juvenile bud 22.286
CRR073305Juvenile bud 32.220
CRR073306Third green 10.141
CRR073307Third green 20.164
CRR073308Third green 30.564
CRR073309Second white 10.504
CRR073310Second white 20.000
CRR073311Second white 30.086
CRR073312Silver flowering 10.358
CRR073313Silver flowering 20.997
CRR073314Silver flowering 30.733
CRR073315Gold flowering 19.369
CRR073316Gold flowering 29.655
CRR073317Gold flowering 38.446
CRR073318Tawny withering 17.549
CRR073319Tawny withering 216.073
CRR073320Tawny withering 31.201