Detail information of GWHGAAZE022607


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008389253.17.2169E-178PREDICTED: lipid phosphate phosphatase 2-like [Malus domestica]
Swissprottr|Q9XI60|LPP2_ARATH1E-158Lipid phosphate phosphatase 2
trEMBLtr|M5XN21|M5XN21_PRUPE6E-176Uncharacterized protein {ECO:0000313|EMBL:EMJ26896.1}
TAIR10AT1G15080.14E-106lipid phosphate phosphatase 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene7527041075272288-
GWHAAZE00000006mRNA7527041075272288-
GWHAAZE00000006exon7527041075270624-
GWHAAZE00000006exon7527081475270873-
GWHAAZE00000006exon7527098275271170-
GWHAAZE00000006exon7527155175271644-
GWHAAZE00000006exon7527176575271962-
GWHAAZE00000006exon7527207375272288-
GWHAAZE00000006CDS7527207375272288-
GWHAAZE00000006CDS7527176575271962-
GWHAAZE00000006CDS7527155175271644-
GWHAAZE00000006CDS7527098275271170-
GWHAAZE00000006CDS7527081475270873-
GWHAAZE00000006CDS7527041075270624-
Transcript Sequence

Network for GWHGAAZE022607

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01569.22PAP21002451.70E-30
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K18693DPP1, DPPL, PLPP4_5 Biosynthesis of secondary metabolites map01110
Glycerolipid metabolismmap00561
Glycerophospholipid metabolismmap00564

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf8.629
SRR3591706second leaf8.787
SRR3591707mature leaf0.913
SRR3591708Shoot apex14.406
SRR3591709Stem10.107
SRR3591710White floral bud6.847
SRR3591711White flower3.100
SRR3591712Green floral bud3.821
SRR3591713Yellow flower0.473
SRP173429 SRR8316895Juvenile bud stage 2.614
SRR8316896Juvenile bud stage 3.382
SRR8316897Juvenile bud stage 1.763
SRR8316894Third green stage 1.638
SRR8316900Third green stage 2.794
SRR8316901Third green stage 2.573
SRR8316898Complete white stage 4.090
SRR8316899Complete white stage 8.604
SRR8316903Complete white stage 6.071
SRR8316902Silver flowering stage1.832
SRR8316904Silver flowering stage1.530
SRR8316905Silver flowering stage0.954
SRR8316906Gold flowering stage 0.683
SRR8316907Gold flowering stage 1.448
SRR8316908Gold flowering stage 0.098
SRP132670SRR6706286Control2.651
SRR6706287Light intensity 50%3.230
SRR6706288Light intensity 20%2.630
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.471
CNS0095593Slightly white alabastrum(diploid) 26.312
CNS0095594Slightly white alabastrum(diploid) 35.460
CNS0095595Whole white alabastrum(diploid) 22.914
CNS0095596Whole white alabastrum(diploid) 32.241
CNS0095597Whole white alabastrum(diploid) 42.334
CNS0095598Silvery flower (diploied) 13.502
CNS0095599Silvery flower (diploied) 23.338
CNS0095600Silvery flower (diploied) 32.609
CNS0095601Golden flower (diploid) 11.635
CNS0095602Golden flower (diploid) 20.852
CNS0095603Golden flower (diploid) 30.669
CNS0095604Slightly white alabastrum(tetraploid) 13.764
CNS0095605Slightly white alabastrum(tetraploid) 23.654
CNS0095606Slightly white alabastrum(tetraploid) 36.348
CNS0095607Whole white alabastrum(tetraploid) 12.210
CNS0095608Whole white alabastrum(tetraploid) 21.011
CNS0095609Whole white alabastrum(tetraploid) 30.913
CNS0095610Silvery flower (tetraploid) 10.845
CNS0095611Silvery flower (tetraploid) 21.707
CNS0095612Silvery flower (tetraploid) 31.287
CNS0095613Golden flower (tetraploid) 10.124
CNS0095614Golden flower (tetraploid) 20.150
CNS0095615Golden flower (tetraploid) 30.146
CRA001975CRR073297Stem 14.744
CRR073298Stem 23.565
CRR073299Stem 32.733
CRR073300Leaf 13.837
CRR073301Leaf 25.895
CRR073302Leaf 31.931
CRR073303Juvenile bud 12.390
CRR073304Juvenile bud 22.407
CRR073305Juvenile bud 35.727
CRR073306Third green 10.070
CRR073307Third green 20.530
CRR073308Third green 31.251
CRR073309Second white 10.000
CRR073310Second white 20.067
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 15.428
CRR073316Gold flowering 26.928
CRR073317Gold flowering 33.600
CRR073318Tawny withering 18.490
CRR073319Tawny withering 23.332
CRR073320Tawny withering 38.371