Detail information of GWHGAAZE022557


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007223285.12.5071E-165hypothetical protein PRUPE_ppa009477mg [Prunus persica]
COGYP_008153123.13E-85hypothetical protein SCE1572_33750
Swissprottr|Q9ZVF6|PAHX_ARATH7E-150Phytanoyl-CoA dioxygenase
trEMBLtr|M5XEZ9|M5XEZ9_PRUPE9E-166Uncharacterized protein {ECO:0000313|EMBL:EMJ24484.1}
TAIR10AT2G01490.11E-119phytanoyl-CoA dioxygenase (PhyH) family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene7446880574470962-
GWHAAZE00000006mRNA7446880574470962-
GWHAAZE00000006exon7446880574468943-
GWHAAZE00000006exon7446903674469180-
GWHAAZE00000006exon7446927474469446-
GWHAAZE00000006exon7446969474469835-
GWHAAZE00000006exon7446993874470006-
GWHAAZE00000006exon7447051674470576-
GWHAAZE00000006exon7447069374470817-
GWHAAZE00000006exon7447090874470962-
GWHAAZE00000006CDS7447090874470962-
GWHAAZE00000006CDS7447069374470817-
GWHAAZE00000006CDS7447051674470576-
GWHAAZE00000006CDS7446993874470006-
GWHAAZE00000006CDS7446969474469835-
GWHAAZE00000006CDS7446927474469446-
GWHAAZE00000006CDS7446903674469180-
GWHAAZE00000006CDS7446880574468943-
Transcript Sequence

Network for GWHGAAZE022557

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05721.14PhyH152681.90E-57
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00477PHYH Peroxisome map04146

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf33.273
SRR3591706second leaf20.585
SRR3591707mature leaf23.772
SRR3591708Shoot apex28.582
SRR3591709Stem44.837
SRR3591710White floral bud55.076
SRR3591711White flower76.654
SRR3591712Green floral bud40.643
SRR3591713Yellow flower92.553
SRP173429 SRR8316895Juvenile bud stage 29.895
SRR8316896Juvenile bud stage 38.909
SRR8316897Juvenile bud stage 19.626
SRR8316894Third green stage 14.921
SRR8316900Third green stage 48.711
SRR8316901Third green stage 44.800
SRR8316898Complete white stage 28.903
SRR8316899Complete white stage 72.750
SRR8316903Complete white stage 43.789
SRR8316902Silver flowering stage34.618
SRR8316904Silver flowering stage49.680
SRR8316905Silver flowering stage23.891
SRR8316906Gold flowering stage 123.048
SRR8316907Gold flowering stage 94.475
SRR8316908Gold flowering stage 123.215
SRP132670SRR6706286Control63.665
SRR6706287Light intensity 50%56.570
SRR6706288Light intensity 20%64.164
CNP0000432CNS0095592Slightly white alabastrum(diploid) 131.981
CNS0095593Slightly white alabastrum(diploid) 227.905
CNS0095594Slightly white alabastrum(diploid) 337.013
CNS0095595Whole white alabastrum(diploid) 226.624
CNS0095596Whole white alabastrum(diploid) 324.750
CNS0095597Whole white alabastrum(diploid) 428.267
CNS0095598Silvery flower (diploied) 133.269
CNS0095599Silvery flower (diploied) 244.026
CNS0095600Silvery flower (diploied) 365.502
CNS0095601Golden flower (diploid) 143.354
CNS0095602Golden flower (diploid) 269.969
CNS0095603Golden flower (diploid) 364.252
CNS0095604Slightly white alabastrum(tetraploid) 126.716
CNS0095605Slightly white alabastrum(tetraploid) 224.797
CNS0095606Slightly white alabastrum(tetraploid) 332.758
CNS0095607Whole white alabastrum(tetraploid) 122.817
CNS0095608Whole white alabastrum(tetraploid) 216.881
CNS0095609Whole white alabastrum(tetraploid) 331.849
CNS0095610Silvery flower (tetraploid) 163.110
CNS0095611Silvery flower (tetraploid) 270.029
CNS0095612Silvery flower (tetraploid) 364.070
CNS0095613Golden flower (tetraploid) 160.093
CNS0095614Golden flower (tetraploid) 269.429
CNS0095615Golden flower (tetraploid) 367.190
CRA001975CRR073297Stem 124.036
CRR073298Stem 221.773
CRR073299Stem 327.181
CRR073300Leaf 128.471
CRR073301Leaf 228.276
CRR073302Leaf 331.405
CRR073303Juvenile bud 135.835
CRR073304Juvenile bud 241.796
CRR073305Juvenile bud 339.015
CRR073306Third green 136.667
CRR073307Third green 238.761
CRR073308Third green 329.171
CRR073309Second white 143.266
CRR073310Second white 238.443
CRR073311Second white 333.368
CRR073312Silver flowering 137.745
CRR073313Silver flowering 241.749
CRR073314Silver flowering 331.813
CRR073315Gold flowering 123.629
CRR073316Gold flowering 226.233
CRR073317Gold flowering 321.506
CRR073318Tawny withering 138.982
CRR073319Tawny withering 240.592
CRR073320Tawny withering 328.603