Detail information of GWHGAAZE022493


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007045507.13.53982E-41PLATZ transcription factor family protein, putative [Theobroma cacao]
trEMBLtr|A0A061EGB3|A0A061EGB3_THECC1E-41PLATZ transcription factor family protein, putative {ECO:0000313|EMBL:EOY01339.1}
TAIR10AT2G01818.13E-23PLATZ transcription factor family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene7344171973442614+
GWHAAZE00000006mRNA7344171973442614+
GWHAAZE00000006exon7344171973441991+
GWHAAZE00000006exon7344242973442614+
GWHAAZE00000006CDS7344171973441991+
GWHAAZE00000006CDS7344242973442614+
Transcript Sequence

Network for GWHGAAZE022493

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04640.15PLATZ701471.30E-14
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyPLATZ

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008270molecular_functionzinc ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf18.706
SRR3591706second leaf17.800
SRR3591707mature leaf11.815
SRR3591708Shoot apex24.388
SRR3591709Stem17.416
SRR3591710White floral bud23.139
SRR3591711White flower23.056
SRR3591712Green floral bud16.655
SRR3591713Yellow flower18.115
SRP173429 SRR8316895Juvenile bud stage 12.325
SRR8316896Juvenile bud stage 14.545
SRR8316897Juvenile bud stage 5.834
SRR8316894Third green stage 6.899
SRR8316900Third green stage 14.357
SRR8316901Third green stage 14.229
SRR8316898Complete white stage 6.372
SRR8316899Complete white stage 23.204
SRR8316903Complete white stage 11.449
SRR8316902Silver flowering stage7.440
SRR8316904Silver flowering stage8.372
SRR8316905Silver flowering stage3.599
SRR8316906Gold flowering stage 13.595
SRR8316907Gold flowering stage 15.820
SRR8316908Gold flowering stage 17.845
SRP132670SRR6706286Control16.533
SRR6706287Light intensity 50%17.574
SRR6706288Light intensity 20%20.417
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.448
CNS0095593Slightly white alabastrum(diploid) 25.627
CNS0095594Slightly white alabastrum(diploid) 36.183
CNS0095595Whole white alabastrum(diploid) 26.231
CNS0095596Whole white alabastrum(diploid) 34.944
CNS0095597Whole white alabastrum(diploid) 44.585
CNS0095598Silvery flower (diploied) 120.658
CNS0095599Silvery flower (diploied) 214.003
CNS0095600Silvery flower (diploied) 321.771
CNS0095601Golden flower (diploid) 19.242
CNS0095602Golden flower (diploid) 221.246
CNS0095603Golden flower (diploid) 320.306
CNS0095604Slightly white alabastrum(tetraploid) 19.712
CNS0095605Slightly white alabastrum(tetraploid) 28.893
CNS0095606Slightly white alabastrum(tetraploid) 321.863
CNS0095607Whole white alabastrum(tetraploid) 15.463
CNS0095608Whole white alabastrum(tetraploid) 23.197
CNS0095609Whole white alabastrum(tetraploid) 312.462
CNS0095610Silvery flower (tetraploid) 118.950
CNS0095611Silvery flower (tetraploid) 222.337
CNS0095612Silvery flower (tetraploid) 314.124
CNS0095613Golden flower (tetraploid) 19.206
CNS0095614Golden flower (tetraploid) 219.011
CNS0095615Golden flower (tetraploid) 319.554
CRA001975CRR073297Stem 115.952
CRR073298Stem 219.661
CRR073299Stem 316.335
CRR073300Leaf 115.079
CRR073301Leaf 214.040
CRR073302Leaf 317.788
CRR073303Juvenile bud 112.623
CRR073304Juvenile bud 210.507
CRR073305Juvenile bud 313.177
CRR073306Third green 15.010
CRR073307Third green 25.497
CRR073308Third green 34.790
CRR073309Second white 13.922
CRR073310Second white 27.936
CRR073311Second white 36.905
CRR073312Silver flowering 18.711
CRR073313Silver flowering 24.527
CRR073314Silver flowering 34.895
CRR073315Gold flowering 18.342
CRR073316Gold flowering 216.252
CRR073317Gold flowering 311.682
CRR073318Tawny withering 111.598
CRR073319Tawny withering 210.679
CRR073320Tawny withering 312.480