Gene detail

Detail information of GWHGAAZE022243

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_002272797.2	0	PREDICTED: receptor-like protein kinase ANXUR1 [Vitis vinifera]
Swissprot	tr\|Q9SR05\|ANX1_ARATH	0	Receptor-like protein kinase ANXUR1 (Precursor)
trEMBL	tr\|D7SYL0\|D7SYL0_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI22880.3}
TAIR10	AT3G04690.1	4E-151	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000006	gene	69069343	69071904	-
GWHAAZE00000006	mRNA	69069343	69071904	-
GWHAAZE00000006	exon	69069343	69069764	-
GWHAAZE00000006	exon	69070110	69071904	-
GWHAAZE00000006	CDS	69070110	69071904	-
GWHAAZE00000006	CDS	69069343	69069764	-

Transcript Sequence
>GWHTAAZE022271 ATGATCCTTAATACTCACATCTTGCATCGTCTCATTTTCCTGTCCATCTTAATAAAGGTTGCCCATTCATCAACCAATTCCTCTGTTTCATTTTTATTGGCTTGTGGATCTTCAAGTCCATCAACAGATGCTAATGGGCGGAATTGGACTCCAGACTCCAAATTCCTCACCTCTCAAAACAATTCCATCTCAGGTACAGCTCAATCCCAAGACCCCTCATTACCCTCTACAATTCCCTACATGAAAGCCAGGATTTTCAAATCCCCATCCACATACAAATTCCCAATCTCCCCTCAAAACCGCCACTGGATTAGACTCCATTTCTACCCATCACCTTTTTACCAAACTTTTAATTCCTCCGCATCCTTTTTCTCCGTAAAAGCTGGCAGATTCACTCTCCTCAACAACTTCAGTGCCTCAATCATTGCCCAAACACTCACCCAAGCTTATATAATAAGAGAATTCTCTCTCAAACCAATCCAATCCAACTTCCTCAGCATTACATTTGCCCCTTCAAATGGCTCTTTTGCCTTTGTCAATGGCATTGAAGTCATTTCAATGCCGGAGATTTTCCATTCAGCCCAATTGGTTGGGTTTTCTGGGGATTTCATTGAGACCAATAACTTCACTTTTCAAACAATGAATAGGCTAAATGTTGGTGGACAGTACATTCCTCCAAATAAAGACTCGGGTCTTACCCGAATTTGGTATGATGACAGTCCTTATTTAGCTGGGGCAGCCTTTGGTGTAACCTCGGAGGCTGCTAAAAGTGTCAAAATCGTGTACTCGAACAATGTGCCTAACTACACTGCTCCGGTTAGTGTTTACAAAACAGCGAGAAGTATGGGGCCTACTCCACAAGTCAACAAGAATTACAATCTAACATGGGTATTTCAAGTTGATACCAATTTCGCATACCTTGTGAGGTTCCATTTCTGCGAGTTTTTGCTACCGGAGGTTCATCAGAGGGTTTTTAGTATTTTTATTAACAATCATACAGCATTTGCCGGGGCAGATGTGATCGCATGGACAAGAGGAATTGGAGTGCCTATTTACAAGGACTTTTTAGTTTATGTTAGTGATGGAAATGATGGTGATGAAGTGTTGTGGCTGGCCCTTCACCCCGATGTGTCGATGAATCCCCAGTACTATGACTCGATCCTCAATGGGTTGGAGATCTTTAAGTTAAATGACAAAAGTGGGAACTTGGCCGGTCCAAATCCAGTACCACTGCCATTGCCTGTCAAGCCAAAAAGGCCATTTGCATCATCAAAAAAGGACACTCGTGAGGGTTTAATTGGCGGGGTTTTAGGAGGGCTAGCCGGGGCCGGTGTAGTTGTTGGATTTGTTGTTTTTGTTTATAAAAAGAGAATCGCCAATGGCAAAAACTATAGCCCAGCCGGTTGGTTGCCTATCTACGCCAGTCCAAGCTCTTCCGGAACGAAGTCAAAGTCATCAAGCTCGGGCAAGAGTAGTGGAAGTAGCCGCCTTTCCACCCTCGGTGGAGGCCTTTGTCGACATTTCTCGTTAGCAGAGATTAAGGTAGGCACCAAGAACTTCGACGAGTCACAAGTTATTGGAGTTGGAGGATTCGGAAAAGTTTATAAAGGGATTATCGATGGAGGGACAAAAGTGGCCATTAAGAGAGCGAACCCGTCTTCACAACAAGGGATCCACGAGTTCAACACGGAGATAGATTTGCTTTCAAAGCTTAGGCACCGGCATTTAGTTTCCTTAATTGGGGCTTGTGAAGAAGATGAAGAGATGATTCTTGTTTATGACTATATGGCTAATGTATTGTGTGCAAGACCAGCAGTTGATCCTAGCCTTCCAAAGGAACAAGTTAGTCTCGCGGATTGGGCCCTACGCTGCCATGAGATGGGCGGTCTAGATGGCATCATAGATCCACTTATAAAAGGCGAGATCAACCCCGAGTGCTTGAACAATTTTGTGGATACAGCTGTGAAATGTTTGTCTGATCAAGCGATTGATCGCCCATCAATGGGCGCAGTGCTGTGGAATCTTGAGTTTGCGCTTCAACTGCAGAATAATCCTGGCGAACCAAAAGTGGTGGCAGAGCAGAAAGCTAATGATGCTTATGTTAAGCATGCAAGATTACTTAGCATTGAAGAGGAAGAAGGTGGGGTAGTCGAGGAATCGGAGGGCCAAAGTACAAACGAATTTTTTTCTCAAATAATGAATCCACAAGGGAGATGA

Network for GWHGAAZE022243

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF12819.8	Malectin_like	34	395	1.50E-39
PF00069.26	Pkinase	521	599	1.90E-13

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.085
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.043
	SRR3591709	Stem	0.061
	SRR3591710	White floral bud	0.043
	SRR3591711	White flower	0.045
	SRR3591712	Green floral bud	0.190
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.156
	SRR8316896	Juvenile bud stage	0.332
	SRR8316897	Juvenile bud stage	0.024
	SRR8316894	Third green stage	0.042
	SRR8316900	Third green stage	0.077
	SRR8316901	Third green stage	0.054
	SRR8316898	Complete white stage	0.077
	SRR8316899	Complete white stage	0.082
	SRR8316903	Complete white stage	0.034
	SRR8316902	Silver flowering stage	0.018
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	0.187
	SRR6706287	Light intensity 50%	0.173
	SRR6706288	Light intensity 20%	0.128
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.296
	CNS0095593	Slightly white alabastrum(diploid) 2	0.000
	CNS0095594	Slightly white alabastrum(diploid) 3	0.035
	CNS0095595	Whole white alabastrum(diploid) 2	0.000
	CNS0095596	Whole white alabastrum(diploid) 3	0.145
	CNS0095597	Whole white alabastrum(diploid) 4	0.000
	CNS0095598	Silvery flower (diploied) 1	0.056
	CNS0095599	Silvery flower (diploied) 2	0.000
	CNS0095600	Silvery flower (diploied) 3	0.035
	CNS0095601	Golden flower (diploid) 1	0.029
	CNS0095602	Golden flower (diploid) 2	0.017
	CNS0095603	Golden flower (diploid) 3	0.010
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.016
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.064
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.305
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.033
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.001
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.107
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	0.017
	CNS0095612	Silvery flower (tetraploid) 3	0.031
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.029
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.000
	CRR073298	Stem 2	0.071
	CRR073299	Stem 3	0.130
	CRR073300	Leaf 1	0.218
	CRR073301	Leaf 2	0.192
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.026
	CRR073304	Juvenile bud 2	0.051
	CRR073305	Juvenile bud 3	0.046
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000