Detail information of GWHGAAZE022231


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006488851.10PREDICTED: DELLA protein GAI1-like [Citrus sinensis]
Swissprottr|Q8S4W7|GAI1_VITVI4E-61DELLA protein GAI1
trEMBLtr|V4RFL4|V4RFL4_9ROSI0Uncharacterized protein {ECO:0000313|EMBL:ESR32638.1}
TAIR10AT3G03450.11E-53RGA-like 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene6896508068966723-
GWHAAZE00000006mRNA6896508068966723-
GWHAAZE00000006exon6896508068966723-
GWHAAZE00000006CDS6896508068966723-
Transcript Sequence

Network for GWHGAAZE022231

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03514.15GRAS1735427.20E-88
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGRAS

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.029
SRR3591706second leaf0.661
SRR3591707mature leaf1.673
SRR3591708Shoot apex0.384
SRR3591709Stem0.162
SRR3591710White floral bud0.831
SRR3591711White flower1.758
SRR3591712Green floral bud1.760
SRR3591713Yellow flower1.081
SRP173429 SRR8316895Juvenile bud stage 0.000
SRR8316896Juvenile bud stage 0.156
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.000
SRR8316900Third green stage 0.110
SRR8316901Third green stage 0.294
SRR8316898Complete white stage 0.041
SRR8316899Complete white stage 0.110
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.152
SRR6706287Light intensity 50%0.069
SRR6706288Light intensity 20%0.061
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.054
CNS0095593Slightly white alabastrum(diploid) 20.237
CNS0095594Slightly white alabastrum(diploid) 30.181
CNS0095595Whole white alabastrum(diploid) 20.019
CNS0095596Whole white alabastrum(diploid) 30.472
CNS0095597Whole white alabastrum(diploid) 40.277
CNS0095598Silvery flower (diploied) 10.335
CNS0095599Silvery flower (diploied) 20.344
CNS0095600Silvery flower (diploied) 30.024
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.214
CNS0095603Golden flower (diploid) 30.048
CNS0095604Slightly white alabastrum(tetraploid) 10.121
CNS0095605Slightly white alabastrum(tetraploid) 20.313
CNS0095606Slightly white alabastrum(tetraploid) 30.225
CNS0095607Whole white alabastrum(tetraploid) 10.192
CNS0095608Whole white alabastrum(tetraploid) 20.278
CNS0095609Whole white alabastrum(tetraploid) 30.406
CNS0095610Silvery flower (tetraploid) 10.286
CNS0095611Silvery flower (tetraploid) 20.457
CNS0095612Silvery flower (tetraploid) 30.260
CNS0095613Golden flower (tetraploid) 10.203
CNS0095614Golden flower (tetraploid) 20.317
CNS0095615Golden flower (tetraploid) 30.081
CRA001975CRR073297Stem 10.000
CRR073298Stem 20.086
CRR073299Stem 30.036
CRR073300Leaf 10.000
CRR073301Leaf 20.210
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.046
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.121
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.231
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.299
CRR073316Gold flowering 20.112
CRR073317Gold flowering 30.309
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.059
CRR073320Tawny withering 30.000