Detail information of GWHGAAZE022229


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008223345.10PREDICTED: DELLA protein RGL1-like [Prunus mume]
Swissprottr|Q8GXW1|RGL2_ARATH6E-46DELLA protein RGL2
trEMBLtr|A0A067G8R7|A0A067G8R7_CITSI0Uncharacterized protein {ECO:0000313|EMBL:KDO71912.1} (Fragment)
TAIR10AT3G03450.19E-43RGA-like 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene6894774668954679-
GWHAAZE00000006mRNA6894774668954679-
GWHAAZE00000006exon6895304868954679-
GWHAAZE00000006exon6894774668948102-
GWHAAZE00000006CDS6895304868954679-
GWHAAZE00000006CDS6894774668948102-
Transcript Sequence

Network for GWHGAAZE022229

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03514.15GRAS2085443.50E-78
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGRAS

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.090
SRR3591706second leaf0.070
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.275
SRR3591709Stem0.094
SRR3591710White floral bud0.000
SRR3591711White flower0.000
SRR3591712Green floral bud0.044
SRR3591713Yellow flower0.062
SRP173429 SRR8316895Juvenile bud stage 0.237
SRR8316896Juvenile bud stage 0.129
SRR8316897Juvenile bud stage 0.140
SRR8316894Third green stage 0.029
SRR8316900Third green stage 0.153
SRR8316901Third green stage 0.182
SRR8316898Complete white stage 0.004
SRR8316899Complete white stage 0.117
SRR8316903Complete white stage 0.146
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.015
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.070
SRR6706287Light intensity 50%0.016
SRR6706288Light intensity 20%0.054
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.049
CNS0095593Slightly white alabastrum(diploid) 20.219
CNS0095594Slightly white alabastrum(diploid) 30.108
CNS0095595Whole white alabastrum(diploid) 20.040
CNS0095596Whole white alabastrum(diploid) 30.036
CNS0095597Whole white alabastrum(diploid) 40.030
CNS0095598Silvery flower (diploied) 10.262
CNS0095599Silvery flower (diploied) 20.285
CNS0095600Silvery flower (diploied) 30.029
CNS0095601Golden flower (diploid) 10.737
CNS0095602Golden flower (diploid) 20.427
CNS0095603Golden flower (diploid) 30.246
CNS0095604Slightly white alabastrum(tetraploid) 10.447
CNS0095605Slightly white alabastrum(tetraploid) 20.597
CNS0095606Slightly white alabastrum(tetraploid) 30.521
CNS0095607Whole white alabastrum(tetraploid) 10.135
CNS0095608Whole white alabastrum(tetraploid) 20.101
CNS0095609Whole white alabastrum(tetraploid) 30.035
CNS0095610Silvery flower (tetraploid) 10.035
CNS0095611Silvery flower (tetraploid) 20.184
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.035
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.025
CRA001975CRR073297Stem 10.342
CRR073298Stem 20.206
CRR073299Stem 30.346
CRR073300Leaf 10.163
CRR073301Leaf 20.242
CRR073302Leaf 30.001
CRR073303Juvenile bud 10.175
CRR073304Juvenile bud 20.004
CRR073305Juvenile bud 30.170
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.032
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.242
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.062
CRR073318Tawny withering 10.390
CRR073319Tawny withering 20.196
CRR073320Tawny withering 30.353