Detail information of GWHGAAZE022228


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008351161.11.47008E-98PREDICTED: DELLA protein RGL2-like [Malus domestica]
Swissprottr|Q8GXW1|RGL2_ARATH9E-35DELLA protein RGL2
trEMBLtr|M5XKD7|M5XKD7_PRUPE6E-98Uncharacterized protein {ECO:0000313|EMBL:EMJ25971.1}
TAIR10AT3G03450.15E-31RGA-like 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene6894674868947476-
GWHAAZE00000006mRNA6894674868947476-
GWHAAZE00000006exon6894674868947476-
GWHAAZE00000006CDS6894674868947476-
Transcript Sequence

Network for GWHGAAZE022228

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03514.15GRAS12382.80E-50
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGRAS

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.115
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud0.000
SRR3591711White flower0.000
SRR3591712Green floral bud0.000
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.200
SRR8316896Juvenile bud stage 0.294
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.354
SRR8316900Third green stage 0.309
SRR8316901Third green stage 0.000
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.142
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.060
SRR8316904Silver flowering stage0.143
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.503
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.077
SRR6706287Light intensity 50%0.338
SRR6706288Light intensity 20%0.119
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.000
CNS0095593Slightly white alabastrum(diploid) 20.419
CNS0095594Slightly white alabastrum(diploid) 30.747
CNS0095595Whole white alabastrum(diploid) 20.379
CNS0095596Whole white alabastrum(diploid) 30.028
CNS0095597Whole white alabastrum(diploid) 40.139
CNS0095598Silvery flower (diploied) 10.000
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.139
CNS0095601Golden flower (diploid) 10.385
CNS0095602Golden flower (diploid) 20.146
CNS0095603Golden flower (diploid) 30.308
CNS0095604Slightly white alabastrum(tetraploid) 10.083
CNS0095605Slightly white alabastrum(tetraploid) 20.247
CNS0095606Slightly white alabastrum(tetraploid) 30.267
CNS0095607Whole white alabastrum(tetraploid) 10.414
CNS0095608Whole white alabastrum(tetraploid) 20.299
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.115
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.112
CRR073298Stem 20.334
CRR073299Stem 30.427
CRR073300Leaf 10.099
CRR073301Leaf 20.043
CRR073302Leaf 30.539
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.056
CRR073305Juvenile bud 30.104
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.249
CRR073313Silver flowering 20.434
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.072
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.096
CRR073319Tawny withering 21.546
CRR073320Tawny withering 30.515