Detail information of GWHGAAZE022063


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010652109.10PREDICTED: BTB/POZ and MATH domain-containing protein 2-like [Vitis vinifera]
Swissprottr|Q9M8J9|BPM2_ARATH0BTB/POZ and MATH domain-containing protein 2
trEMBLtr|D7TPA6|D7TPA6_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI32329.3}
TAIR10AT3G06190.14E-177BTB-POZ and MATH domain 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene6637619266380426-
GWHAAZE00000006mRNA6637619266380426-
GWHAAZE00000006exon6637619266376373-
GWHAAZE00000006exon6637657366376849-
GWHAAZE00000006exon6637760666377954-
GWHAAZE00000006exon6638000866380426-
GWHAAZE00000006CDS6638000866380426-
GWHAAZE00000006CDS6637760666377954-
GWHAAZE00000006CDS6637657366376849-
GWHAAZE00000006CDS6637619266376373-
Transcript Sequence

Network for GWHGAAZE022063

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00651.32BTB1953114.60E-24
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTRAF

KEGG pathway

KO Enzyme pathway mapID
K10523SPOP Hedgehog signaling pathway map04340
Hedgehog signaling pathway - flymap04341

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf56.038
SRR3591706second leaf37.517
SRR3591707mature leaf40.126
SRR3591708Shoot apex49.112
SRR3591709Stem59.681
SRR3591710White floral bud85.881
SRR3591711White flower74.444
SRR3591712Green floral bud61.453
SRR3591713Yellow flower73.380
SRP173429 SRR8316895Juvenile bud stage 25.622
SRR8316896Juvenile bud stage 37.514
SRR8316897Juvenile bud stage 20.851
SRR8316894Third green stage 17.049
SRR8316900Third green stage 53.616
SRR8316901Third green stage 49.639
SRR8316898Complete white stage 31.388
SRR8316899Complete white stage 79.531
SRR8316903Complete white stage 45.108
SRR8316902Silver flowering stage29.200
SRR8316904Silver flowering stage41.199
SRR8316905Silver flowering stage23.087
SRR8316906Gold flowering stage 63.595
SRR8316907Gold flowering stage 62.197
SRR8316908Gold flowering stage 61.741
SRP132670SRR6706286Control83.107
SRR6706287Light intensity 50%82.918
SRR6706288Light intensity 20%90.137
CNP0000432CNS0095592Slightly white alabastrum(diploid) 135.203
CNS0095593Slightly white alabastrum(diploid) 237.530
CNS0095594Slightly white alabastrum(diploid) 335.484
CNS0095595Whole white alabastrum(diploid) 243.185
CNS0095596Whole white alabastrum(diploid) 341.145
CNS0095597Whole white alabastrum(diploid) 445.308
CNS0095598Silvery flower (diploied) 142.259
CNS0095599Silvery flower (diploied) 238.496
CNS0095600Silvery flower (diploied) 373.515
CNS0095601Golden flower (diploid) 141.926
CNS0095602Golden flower (diploid) 276.121
CNS0095603Golden flower (diploid) 365.943
CNS0095604Slightly white alabastrum(tetraploid) 146.877
CNS0095605Slightly white alabastrum(tetraploid) 247.411
CNS0095606Slightly white alabastrum(tetraploid) 360.237
CNS0095607Whole white alabastrum(tetraploid) 147.851
CNS0095608Whole white alabastrum(tetraploid) 251.979
CNS0095609Whole white alabastrum(tetraploid) 352.794
CNS0095610Silvery flower (tetraploid) 179.229
CNS0095611Silvery flower (tetraploid) 283.193
CNS0095612Silvery flower (tetraploid) 373.671
CNS0095613Golden flower (tetraploid) 157.292
CNS0095614Golden flower (tetraploid) 270.194
CNS0095615Golden flower (tetraploid) 380.439
CRA001975CRR073297Stem 153.138
CRR073298Stem 251.812
CRR073299Stem 374.248
CRR073300Leaf 168.583
CRR073301Leaf 262.748
CRR073302Leaf 374.771
CRR073303Juvenile bud 181.164
CRR073304Juvenile bud 291.442
CRR073305Juvenile bud 3108.822
CRR073306Third green 182.816
CRR073307Third green 291.458
CRR073308Third green 379.751
CRR073309Second white 1100.820
CRR073310Second white 266.059
CRR073311Second white 366.246
CRR073312Silver flowering 182.968
CRR073313Silver flowering 291.865
CRR073314Silver flowering 369.958
CRR073315Gold flowering 153.776
CRR073316Gold flowering 268.046
CRR073317Gold flowering 374.706
CRR073318Tawny withering 172.551
CRR073319Tawny withering 268.028
CRR073320Tawny withering 369.246