Gene detail

Detail information of GWHGAAZE022062

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	KDP40088.1	0	hypothetical protein JCGZ_02086 [Jatropha curcas]
COG	YP_003112167.1	6E-28	serine/threonine protein kinase
Swissprot	tr\|Q8W4J2\|MPK16_ARATH	0	Mitogen-activated protein kinase 16
trEMBL	tr\|A0A067KYM8\|A0A067KYM8_JATCU	0	Uncharacterized protein {ECO:0000313\|EMBL:KDP40088.1}
TAIR10	AT5G19010.1	0	mitogen-activated protein kinase 16

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000006	gene	66368467	66373829	+
GWHAAZE00000006	mRNA	66368467	66373829	+
GWHAAZE00000006	exon	66368467	66368935	+
GWHAAZE00000006	exon	66369027	66369154	+
GWHAAZE00000006	exon	66369288	66369347	+
GWHAAZE00000006	exon	66369437	66369586	+
GWHAAZE00000006	exon	66369675	66369830	+
GWHAAZE00000006	exon	66370073	66370284	+
GWHAAZE00000006	exon	66370517	66370624	+
GWHAAZE00000006	exon	66370753	66370904	+
GWHAAZE00000006	exon	66373558	66373829	+
GWHAAZE00000006	CDS	66368467	66368935	+
GWHAAZE00000006	CDS	66369027	66369154	+
GWHAAZE00000006	CDS	66369288	66369347	+
GWHAAZE00000006	CDS	66369437	66369586	+
GWHAAZE00000006	CDS	66369675	66369830	+
GWHAAZE00000006	CDS	66370073	66370284	+
GWHAAZE00000006	CDS	66370517	66370624	+
GWHAAZE00000006	CDS	66370753	66370904	+
GWHAAZE00000006	CDS	66373558	66373829	+

Transcript Sequence
>GWHTAAZE022090 GGGTATTTGAACACATCATATAATGTCAATAATGCTAAATTTTTCGGTGTTTTGTCACAGGCACCAGCGGATGTAGACTTTTTCACCGAATACGGTGAAGGCAGTAGGTATAAAATAGAGGAAGTAATTGGTAAAGGAAGCTATGGAGTTGTCTGCTCTGCTTACGATACACATATTGGGGAAAAGGTCGCCATTAAAAAAATAAATGACATTTTCGAACATGTTTCTGATGCAACTCGAATCCTTCGTGAGATTAAGCTTCTTAGGCTCCTTCGTCACCCAGATATCGTGGAAATCAAGCACATCCTATTGCCTCCTTCAAGAAGGGAATTCAGAGACATTTATGTTGTTTTCGAACTCATGGAATCTGATTTGCACCAGGTTATTAAAGCAAATGATGATTTGACACCAGAACATTATCAGTTCTTTCTCTATCAGTTACTTCGAGGCTTAAAATACATACACACAGCAAATGTGTTCCATCGTGATCTAAAACCCAAAAATATCTTAGCAAACGCGGACTGCAAACTGAAAATATGCGACTTTGGTCTTGCAAGAGTTGCCTTTAATGATACTCCTACAGCTATATTTTGGACGGATTATGTTGCAACAAGATGGTATAGGGCTCCTGAATTGTGTGGATCCTTTTTCTCTAAGTACACACCTGCAATCGATATATGGAGCATTGGCTGCATATTTGCAGAGCTTTTAACTGGAAAACCGCTCTTTCCTGGGAAGAATGTAGTCCATCAGTTGGACCTGATGACCGATTTTTTGGGAACACCATCCGCTGAAGCAATAGGCAGGATAAGAAACGAGAAGGCTAGGAGATATTTAAGCAGTATGAGGAGGAAAAGGCCAGTTCCTTTCTCCCAGAAGTTTCCGAATGTTGATCCCCTAGCACTTCGTTTGTTAGAAAGAATGCTAGCTTTTGAACCCAAGGATCGACCTTCTGCTGAAGAGGCTCTTCAAGATCCGTACTTTAAAAATTTGGCCAAGGTTGAACGGGAGCCTTCTGCCCAACCAGTCACAAAGATGGAATTTGAATTTGAGAGACGAAGGGTTACGAAGGAAGATGTAAGAGAGTTGATATATAGAGAGATTCTTGAATACCATCCAAAAATGTTGCAGGAGTTCTTGGATGGAGCAGAACCAACAGGGTTCATGTATCCAAGTGCTGTTGACCAATTTAAGAAGCAATTTGCTTACCTTGAGGAGCACTACGGAAAGGGTGGAGCTGCTGCTGCTCCACCGGAGAGGCAACACGCATCCTCATTGCCCAGGCCATGTGTATTATACTCAGATGAATCGGCACAAAATTCGGCAGAGGTCACCAATAATCTATCTAAATGTTCCATCAATGACGTTGAGAAGCCGCAAATGGACAAGAAGCCTTTTGGGATGCCAACCACAAAACCTCCTCTCCAACTCCAAGCAGGCTCCGCAAGGCCTGGAAAAGCGGTTGGTGCGGTTGGTTCAGTGATGCGTTACAACAACTGTGGAGCAGAGGCTCTTGAACAGCGAAGAGTGGTTAGAAATCCACCTGTTCCTACTTCTTCGTACCCGAGAAGGAACCCGCCTTATAAAACCGAAAGGGGAGAAGATAGCATCGTTGAAGGATCGAACGGATTGCAGCCAAAGCCTCCATACGTGCCAAGGAAAGTGGCTGCTGCTCAAGGTGGACCCAGTGGTAGTCAGTGGTATTGA

Network for GWHGAAZE022062

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	37	328	6.50E-67

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	CMGC_MAPK

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0005524	molecular_function	ATP binding
GO:0004672	molecular_function	protein kinase activity
GO:0004707	molecular_function	MAP kinase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	28.333
	SRR3591706	second leaf	35.466
	SRR3591707	mature leaf	42.398
	SRR3591708	Shoot apex	28.668
	SRR3591709	Stem	25.496
	SRR3591710	White floral bud	23.544
	SRR3591711	White flower	35.353
	SRR3591712	Green floral bud	16.368
	SRR3591713	Yellow flower	29.050
SRP173429	SRR8316895	Juvenile bud stage	15.683
	SRR8316896	Juvenile bud stage	19.886
	SRR8316897	Juvenile bud stage	9.214
	SRR8316894	Third green stage	8.684
	SRR8316900	Third green stage	20.446
	SRR8316901	Third green stage	22.269
	SRR8316898	Complete white stage	10.208
	SRR8316899	Complete white stage	29.650
	SRR8316903	Complete white stage	18.661
	SRR8316902	Silver flowering stage	15.821
	SRR8316904	Silver flowering stage	19.842
	SRR8316905	Silver flowering stage	10.267
	SRR8316906	Gold flowering stage	38.369
	SRR8316907	Gold flowering stage	31.061
	SRR8316908	Gold flowering stage	38.707
SRP132670	SRR6706286	Control	15.804
	SRR6706287	Light intensity 50%	16.149
	SRR6706288	Light intensity 20%	15.654
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	11.839
	CNS0095593	Slightly white alabastrum(diploid) 2	13.704
	CNS0095594	Slightly white alabastrum(diploid) 3	13.191
	CNS0095595	Whole white alabastrum(diploid) 2	11.189
	CNS0095596	Whole white alabastrum(diploid) 3	5.691
	CNS0095597	Whole white alabastrum(diploid) 4	9.028
	CNS0095598	Silvery flower (diploied) 1	23.424
	CNS0095599	Silvery flower (diploied) 2	17.999
	CNS0095600	Silvery flower (diploied) 3	36.908
	CNS0095601	Golden flower (diploid) 1	21.173
	CNS0095602	Golden flower (diploid) 2	39.760
	CNS0095603	Golden flower (diploid) 3	36.201
	CNS0095604	Slightly white alabastrum(tetraploid) 1	12.980
	CNS0095605	Slightly white alabastrum(tetraploid) 2	9.828
	CNS0095606	Slightly white alabastrum(tetraploid) 3	27.929
	CNS0095607	Whole white alabastrum(tetraploid) 1	6.920
	CNS0095608	Whole white alabastrum(tetraploid) 2	5.619
	CNS0095609	Whole white alabastrum(tetraploid) 3	15.844
	CNS0095610	Silvery flower (tetraploid) 1	36.876
	CNS0095611	Silvery flower (tetraploid) 2	32.074
	CNS0095612	Silvery flower (tetraploid) 3	21.240
	CNS0095613	Golden flower (tetraploid) 1	21.828
	CNS0095614	Golden flower (tetraploid) 2	32.665
	CNS0095615	Golden flower (tetraploid) 3	42.946
CRA001975	CRR073297	Stem 1	23.944
	CRR073298	Stem 2	21.488
	CRR073299	Stem 3	23.345
	CRR073300	Leaf 1	21.205
	CRR073301	Leaf 2	24.942
	CRR073302	Leaf 3	13.523
	CRR073303	Juvenile bud 1	15.837
	CRR073304	Juvenile bud 2	22.018
	CRR073305	Juvenile bud 3	23.148
	CRR073306	Third green 1	31.778
	CRR073307	Third green 2	26.546
	CRR073308	Third green 3	32.595
	CRR073309	Second white 1	26.963
	CRR073310	Second white 2	30.720
	CRR073311	Second white 3	30.027
	CRR073312	Silver flowering 1	31.355
	CRR073313	Silver flowering 2	25.877
	CRR073314	Silver flowering 3	22.743
	CRR073315	Gold flowering 1	11.893
	CRR073316	Gold flowering 2	14.020
	CRR073317	Gold flowering 3	13.493
	CRR073318	Tawny withering 1	17.821
	CRR073319	Tawny withering 2	26.568
	CRR073320	Tawny withering 3	15.706