Gene detail

Detail information of GWHGAAZE021778

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011091394.1	0	PREDICTED: uncharacterized protein LOC105171847 isoform X2 [Sesamum indicum]
COG	YP_001958461.1	4E-29	hypothetical protein Aasi_1443
Swissprot	tr\|Q9FPR3\|EDR1_ARATH	2E-49	Serine/threonine-protein kinase EDR1
trEMBL	tr\|A0A061EKJ2\|A0A061EKJ2_THECC	0	PB1 domain-containing protein tyrosine kinase, putative {ECO:0000313\|EMBL:EOY05381.1}
TAIR10	AT1G04700.1	7E-151	PB1 domain-containing protein tyrosine kinase

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000006	gene	61232046	61240203	+
GWHAAZE00000006	mRNA	61232046	61240203	+
GWHAAZE00000006	exon	61232046	61234535	+
GWHAAZE00000006	exon	61235764	61235850	+
GWHAAZE00000006	exon	61237012	61237164	+
GWHAAZE00000006	exon	61237725	61237885	+
GWHAAZE00000006	exon	61237972	61238119	+
GWHAAZE00000006	exon	61238806	61238928	+
GWHAAZE00000006	exon	61239363	61239450	+
GWHAAZE00000006	exon	61240016	61240203	+
GWHAAZE00000006	CDS	61232046	61234535	+
GWHAAZE00000006	CDS	61235764	61235850	+
GWHAAZE00000006	CDS	61237012	61237164	+
GWHAAZE00000006	CDS	61237725	61237885	+
GWHAAZE00000006	CDS	61237972	61238119	+
GWHAAZE00000006	CDS	61238806	61238928	+
GWHAAZE00000006	CDS	61239363	61239450	+
GWHAAZE00000006	CDS	61240016	61240203	+

Transcript Sequence
>GWHTAAZE021802 ATGTCAAGTAAGGGCCCCGGTACTTCAGGCCAACAGTCGAAAAATGATGCCACACAAAGTGAAGGATTCTATGGGGATAAACATATACACAACATTTCTGTACAGACAGGTGAAGAATTTTCTGCAGAGTTTCTACGGGATCGTGCTACTACAAGAAGAGACCCAGTTGTAAGTAATACGGACCAACGTCAGTCGAGGAGAGTGGGATTTGACTTTACTCAGAATCAGCAACTTGTTTACGAGGATCTTACAAGCCATCATGGGATAAAAAGAATTGATTCTGAAAATATTTCAGATTTTTCTAACAGATATGTTATGGATGGAGAGAACAGGGTGAATTCTGATGAAGCTAATTTTGATCGAGCTTGTCTTCATCAATCAGACTCTCCTCTTTCGTACCAAACTGCTACGCGATTTCACCAATCGGATTCTCCGCGTGGGTACCAAGCTGCTAAACTAGTTCTTCAATCGGATTCTCCTCGTACATACAAAGCTTCTATGCTGGTCCATCAATCAGACTCTCCTCATTCATACCAAGCTGCTACACTAGCTCATCAACCAGACTCTCCTTCGTATCAACCCGGTACACCAGTTCACCTATTAGATTCTCCGCATTCTTTTTCTGGGAAAATAAAATTTCTCTGCAGCTTTGGGGGAAGAATATTACCGAGGCCAAGTGATGGAAAGCTTAGATATGTGGGTGGGGAGACAAGAATCATATCAATCAGACAAAATCTTATGTATAACGAACTTGTGAAGAAAACTTCAGCCATTTGCTCTCAGACTCATACAATCAAATACCAGCTCCCGGGCGAGGATCTTGATGCACTTATATCCGTATGTTCCGATGAGGATCTTCATAATATGATTGAGGAATATCATGATCTTGAAAGAGGTTCTCAAAGGCTACGGATATTTCTTGTACCTTCAAGCGACCCCGAGAGCCCATGTTCTTTTGAATCAAGGAATGTACAACAGACTGATGCTGATTATCAGTATGTTGTTGCTGTAAATGGTATGTTGGACCCAAGTCCAAGGAAGAGCTCTAGTAGGGAGAGTTTGACTGGTCAAGCAAGCCAGTGGGGAAATACATCAGAATATAGTCCAACCTTCCAAAGAGAGTCTCCCACTCCCTTTAATCCTCAGAATATGAAGCACGCAATTCCCTCTGCTCCATATTTCAATGCACCCCAGACCTCACCCAAGGCATATTTTCAATCTCCTTTATCTCAAGTACCCTATAAGGTTAAAGATCTTAAGAATTCCCATATGAAAATGTATGAGGATCGTACTTGCCCTGTTGTTCATGAATGCAACAGCCCGTATATGGACAGACCATCATACAACATTTCTTATCGTGTTGATGCCACAGCCTATAATTGCAATCACGCCATTGATACCGGGCCGGTGGTGAATTCCCATCAACAAGATGTTCCCAATCAGACCCATGAGGTGCGTTCTTACAATTGTCACCCTGGTGCGCATTTGGTGTCTTCTACACTGAACGCTGAACATGGTGCAGATTCTGAGATGCCGCCTGTTCCTAGTGAATTTGCAGTTCACTCTCACAAATTCCCTTCTTCTCAAGATATAGCTGGTATGTTTTCTGGATCCAATGTTCCAGATAATTCCCATCAGAAAATGTCTCATGTGCTCTCTGACTCAGAAGTGCAATATGTAGAGAGGCCAGATTACAGTTTAGAAGAAGGGATGATCCAATCGAGAGTGGATTTTAGAACTGAAAATTTGCCGTCCCTTGCAATGCCAAGTTCGTCACAAAAATGGACAATGCAACAAGAGTATACAGATGAGAAACTCCAAGTGGCTAGCAATAAGAATCATCTGACTTTCAAGATAGAAGACCTTCGCAAGGAGCATATTGGTTGGGGTCAAGATATGAGAAAGTGCACTGAGAAAAATGATGCTTGTTTAGTTAACGAAAATAAAGACCATGAGTTAAATGATAACATGGCATCACATGCTGATGCTTTGGAACATAAGACAAATTTGTCAAACATTCACTTGCATCCTAATAATGTTACTCATTTAGGACCAGAGCCAACTTTTGTAAACCCAGACAATTTTACTCATTTTCTAGGATGCAAGTCCAATAGAGGTTTAAATTTGCACGGGGGTGAAACTCTTATCAATGAAGTGCCAATTCCGAATACAGCCATTGATGCTGGTACTGTTTTTACTCTCGGTGTGGAGGACCCATCGAGCGATACTGGTAGTGTTTCTGAAAGAGAAGGCTCTAGAGGAAAAAAACATTCTGTGGGATCGAATTATGGAGATGCCGTTTTTTTCCAATCACAGTCCTCAGATAGATATGACAATAGCAACGAACCCGAATTTACAGTTATTGTTGAAGATGTAACTGACAGATTGCTTCCTGATATTCCCTTATCCTCGACAATCGTGCCACTTGTACAAGATGAACCTAGTGATGGAGTTTTATCCACTAGAGAAACTGAGAGTGGGAGTGTTGAGGATGCTAAGGGCGATGACTCTTATAACCACAAATCTTTCAATGATGCTGCAATAGCTGAAGTAGAAGCAGGCATCTACGGCTTGCAGATAATAAGAAACGCTGATCTTGAAGAACTTCAAGAGTTAGGATCTGGTACATTTGGAACTGTTTATCATGGGAAATGGAGGGGAACGGATGTTGCTATCAAGAGAATAAAAAAGAGCTGTTTCTCTGGGAGATCATCAGAGCAAGAACGTTTGACCAAAGAGTTCTGGAGGGAGGCTCAGATCCTGTCAAAACTTCACCACCCAAATGTGGTAGCATTTTATGGTGTGGTTCCCGATGGACCTGGGGGAACTTTAGCTACTGTAACTGAATTCATGATTGATGGATCACTACGGCATGTTCTAAGGAAGGATCGAGTGCTTGATCGGCGTAAAAAGCTTATAATTGTGAGGGATGCTGCCTTTGGCATGGAGTATTTACATTTGCGAAATATTGTGCATTTTGATTTGAAATGTGACAACTTGCTTGTCAATTTGGGAGATCCCCAACGACCTGTATGCAAGGTTGGTGATTTCGGTTTATCAAGAATAAAGCGAAATACACTTGTTTCGGGTGGCGTGCGAGGAACGCTTCCATGGATGGCACCAGAGCTATTAAATGGTAGCAGTAATCGGGTTTCGGAGAAGGTTGATGTATTCTCATTTGGAATCACAATGTGGGAGATCTTGACTGGGGAAGAGCCCTACGCGAACATGCATTGTGGTGCCATCATAGGTGGGATTGTGAATAACACACTGAGACCTCCAATTCCGGAACGTTGTGATCCAGAGTGGAGAAAGTTGATGGAAGATTGCTGGTCACCTGACCCATCAGCCAGGCCTTCATTCACAGAGATAACAAACAGGCTTGGTGTAATGTCAAAGGGGCTCCACCAAAAGCGACATAATCAGTCAAAGACATGA

Network for GWHGAAZE021778

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00564.25	PB1	227	309	4.20E-20
PF07714.18	PK_Tyr_Ser-Thr	868	1128	4.50E-62

Protein Sequence

>GWHPAAZE021791
MSSKGPGTSGQQSKNDATQSEGFYGDKHIHNISVQTGEEFSAEFLRDRATTRRDPVVSNTDQRQSRRVGFDFTQNQQLVYEDLTSHHGIKRIDSENISDFSNRYVMDGENRVNSDEANFDRACLHQSDSPLSYQTATRFHQSDSPRGYQAAKLVLQSDSPRTYKASMLVHQSDSPHSYQAATLAHQPDSPSYQPGTPVHLLDSPHSFSGKIKFLCSFGGRILPRPSDGKLRYVGGETRIISIRQNLMYNELVKKTSAICSQTHTIKYQLPGEDLDALISVCSDEDLHNMIEEYHDLERGSQRLRIFLVPSSDPESPCSFESRNVQQTDADYQYVVAVNGMLDPSPRKSSSRESLTGQASQWGNTSEYSPTFQRESPTPFNPQNMKHAIPSAPYFNAPQTSPKAYFQSPLSQVPYKVKDLKNSHMKMYEDRTCPVVHECNSPYMDRPSYNISYRVDATAYNCNHAIDTGPVVNSHQQDVPNQTHEVRSYNCHPGAHLVSSTLNAEHGADSEMPPVPSEFAVHSHKFPSSQDIAGMFSGSNVPDNSHQKMSHVLSDSEVQYVERPDYSLEEGMIQSRVDFRTENLPSLAMPSSSQKWTMQQEYTDEKLQVASNKNHLTFKIEDLRKEHIGWGQDMRKCTEKNDACLVNENKDHELNDNMASHADALEHKTNLSNIHLHPNNVTHLGPEPTFVNPDNFTHFLGCKSNRGLNLHGGETLINEVPIPNTAIDAGTVFTLGVEDPSSDTGSVSEREGSRGKKHSVGSNYGDAVFFQSQSSDRYDNSNEPEFTVIVEDVTDRLLPDIPLSSTIVPLVQDEPSDGVLSTRETESGSVEDAKGDDSYNHKSFNDAAIAEVEAGIYGLQIIRNADLEELQELGSGTFGTVYHGKWRGTDVAIKRIKKSCFSGRSSEQERLTKEFWREAQILSKLHHPNVVAFYGVVPDGPGGTLATVTEFMIDGSLRHVLRKDRVLDRRKKLIIVRDAAFGMEYLHLRNIVHFDLKCDNLLVNLGDPQRPVCKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGSSNRVSEKVDVFSFGITMWEILTGEEPYANMHCGAIIGGIVNNTLRPPIPERCDPEWRKLMEDCWSPDPSARPSFTEITNRLGVMSKGLHQKRHNQSKT

Gene family

Gene family	subfamily
Protein Kinases Family	TKL-Pl-6

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding
GO:0005515	molecular_function	protein binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.203
	SRR3591706	second leaf	0.138
	SRR3591707	mature leaf	0.091
	SRR3591708	Shoot apex	0.188
	SRR3591709	Stem	0.287
	SRR3591710	White floral bud	4.129
	SRR3591711	White flower	0.123
	SRR3591712	Green floral bud	3.286
	SRR3591713	Yellow flower	0.125
SRP173429	SRR8316895	Juvenile bud stage	1.128
	SRR8316896	Juvenile bud stage	2.601
	SRR8316897	Juvenile bud stage	1.093
	SRR8316894	Third green stage	0.687
	SRR8316900	Third green stage	2.330
	SRR8316901	Third green stage	2.790
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.125
	SRR8316903	Complete white stage	0.000
	SRR8316902	Silver flowering stage	0.064
	SRR8316904	Silver flowering stage	0.122
	SRR8316905	Silver flowering stage	0.030
	SRR8316906	Gold flowering stage	0.012
	SRR8316907	Gold flowering stage	0.069
	SRR8316908	Gold flowering stage	0.055
SRP132670	SRR6706286	Control	1.116
	SRR6706287	Light intensity 50%	0.940
	SRR6706288	Light intensity 20%	0.951
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	2.247
	CNS0095593	Slightly white alabastrum(diploid) 2	1.198
	CNS0095594	Slightly white alabastrum(diploid) 3	2.050
	CNS0095595	Whole white alabastrum(diploid) 2	3.464
	CNS0095596	Whole white alabastrum(diploid) 3	4.086
	CNS0095597	Whole white alabastrum(diploid) 4	4.785
	CNS0095598	Silvery flower (diploied) 1	0.269
	CNS0095599	Silvery flower (diploied) 2	0.519
	CNS0095600	Silvery flower (diploied) 3	0.335
	CNS0095601	Golden flower (diploid) 1	0.221
	CNS0095602	Golden flower (diploid) 2	0.210
	CNS0095603	Golden flower (diploid) 3	0.252
	CNS0095604	Slightly white alabastrum(tetraploid) 1	3.163
	CNS0095605	Slightly white alabastrum(tetraploid) 2	3.222
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.333
	CNS0095607	Whole white alabastrum(tetraploid) 1	5.512
	CNS0095608	Whole white alabastrum(tetraploid) 2	7.681
	CNS0095609	Whole white alabastrum(tetraploid) 3	4.103
	CNS0095610	Silvery flower (tetraploid) 1	0.077
	CNS0095611	Silvery flower (tetraploid) 2	0.342
	CNS0095612	Silvery flower (tetraploid) 3	1.060
	CNS0095613	Golden flower (tetraploid) 1	0.153
	CNS0095614	Golden flower (tetraploid) 2	0.103
	CNS0095615	Golden flower (tetraploid) 3	0.885
CRA001975	CRR073297	Stem 1	1.308
	CRR073298	Stem 2	0.780
	CRR073299	Stem 3	0.609
	CRR073300	Leaf 1	2.109
	CRR073301	Leaf 2	1.602
	CRR073302	Leaf 3	0.503
	CRR073303	Juvenile bud 1	1.225
	CRR073304	Juvenile bud 2	1.189
	CRR073305	Juvenile bud 3	0.166
	CRR073306	Third green 1	0.605
	CRR073307	Third green 2	0.487
	CRR073308	Third green 3	0.891
	CRR073309	Second white 1	0.036
	CRR073310	Second white 2	0.348
	CRR073311	Second white 3	0.418
	CRR073312	Silver flowering 1	1.103
	CRR073313	Silver flowering 2	0.641
	CRR073314	Silver flowering 3	0.259
	CRR073315	Gold flowering 1	0.455
	CRR073316	Gold flowering 2	0.031
	CRR073317	Gold flowering 3	0.241
	CRR073318	Tawny withering 1	1.383
	CRR073319	Tawny withering 2	1.271
	CRR073320	Tawny withering 3	1.512