Detail information of GWHGAAZE021733


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAAF79541.1AC023673_290F21D18.6 [Arabidopsis thaliana]
COGYP_008151634.13E-25hypothetical protein SCE1572_26190
Swissprottr|Q41328|PTI1_SOLLC2E-139Pto-interacting protein 1
trEMBLtr|Q9LNH4|Q9LNH4_ARATH0F21D18.6 {ECO:0000313|EMBL:AAF79541.1}
TAIR10AT3G17410.14E-110Protein kinase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene6050819260518322-
GWHAAZE00000006mRNA6050819260518322-
GWHAAZE00000006exon6051725360518322-
GWHAAZE00000006exon6051035860510661-
GWHAAZE00000006exon6051014160510267-
GWHAAZE00000006exon6050937260509660-
GWHAAZE00000006exon6050873360508865-
GWHAAZE00000006exon6050850960508595-
GWHAAZE00000006exon6050819260508323-
GWHAAZE00000006CDS6051725360518322-
GWHAAZE00000006CDS6051035860510661-
GWHAAZE00000006CDS6051014160510267-
GWHAAZE00000006CDS6050937260509660-
GWHAAZE00000006CDS6050873360508865-
GWHAAZE00000006CDS6050850960508595-
GWHAAZE00000006CDS6050819260508323-
Transcript Sequence

Network for GWHGAAZE021733

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.18PK_Tyr_Ser-Thr463188.90E-45
PF07714.18PK_Tyr_Ser-Thr4206968.40E-34
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_RLCK-VIII

KEGG pathway

KO Enzyme pathway mapID
K13436PTI1 Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding
GO:0004674molecular_functionprotein serine/threonine kinase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.237
SRR3591706second leaf0.567
SRR3591707mature leaf0.296
SRR3591708Shoot apex0.243
SRR3591709Stem0.782
SRR3591710White floral bud1.023
SRR3591711White flower0.958
SRR3591712Green floral bud0.429
SRR3591713Yellow flower1.242
SRP173429 SRR8316895Juvenile bud stage 0.327
SRR8316896Juvenile bud stage 0.393
SRR8316897Juvenile bud stage 0.107
SRR8316894Third green stage 0.143
SRR8316900Third green stage 0.326
SRR8316901Third green stage 0.269
SRR8316898Complete white stage 0.310
SRR8316899Complete white stage 0.326
SRR8316903Complete white stage 0.317
SRR8316902Silver flowering stage0.367
SRR8316904Silver flowering stage0.625
SRR8316905Silver flowering stage0.173
SRR8316906Gold flowering stage 0.697
SRR8316907Gold flowering stage 1.266
SRR8316908Gold flowering stage 0.613
SRP132670SRR6706286Control0.321
SRR6706287Light intensity 50%0.179
SRR6706288Light intensity 20%0.253
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.105
CNS0095593Slightly white alabastrum(diploid) 20.095
CNS0095594Slightly white alabastrum(diploid) 30.325
CNS0095595Whole white alabastrum(diploid) 20.046
CNS0095596Whole white alabastrum(diploid) 30.129
CNS0095597Whole white alabastrum(diploid) 40.250
CNS0095598Silvery flower (diploied) 10.722
CNS0095599Silvery flower (diploied) 20.387
CNS0095600Silvery flower (diploied) 30.415
CNS0095601Golden flower (diploid) 10.178
CNS0095602Golden flower (diploid) 20.253
CNS0095603Golden flower (diploid) 30.565
CNS0095604Slightly white alabastrum(tetraploid) 10.022
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.254
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.010
CNS0095609Whole white alabastrum(tetraploid) 30.209
CNS0095610Silvery flower (tetraploid) 10.843
CNS0095611Silvery flower (tetraploid) 20.400
CNS0095612Silvery flower (tetraploid) 30.595
CNS0095613Golden flower (tetraploid) 10.131
CNS0095614Golden flower (tetraploid) 20.545
CNS0095615Golden flower (tetraploid) 30.895
CRA001975CRR073297Stem 10.361
CRR073298Stem 20.321
CRR073299Stem 30.073
CRR073300Leaf 10.276
CRR073301Leaf 20.454
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.162
CRR073304Juvenile bud 20.052
CRR073305Juvenile bud 30.280
CRR073306Third green 10.155
CRR073307Third green 20.043
CRR073308Third green 30.090
CRR073309Second white 10.165
CRR073310Second white 20.197
CRR073311Second white 30.059
CRR073312Silver flowering 10.237
CRR073313Silver flowering 20.056
CRR073314Silver flowering 30.179
CRR073315Gold flowering 10.165
CRR073316Gold flowering 20.315
CRR073317Gold flowering 30.105
CRR073318Tawny withering 10.202
CRR073319Tawny withering 20.512
CRR073320Tawny withering 30.386