Gene detail

Detail information of GWHGAAZE021677

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU40180.1	4.30634E-88	hypothetical protein MIMGU_mgv1a022123mg [Erythranthe guttata]
COG	YP_008151634.1	5E-12	hypothetical protein SCE1572_26190
Swissprot	tr\|Q3E8W4\|ANX2_ARATH	2E-89	Receptor-like protein kinase ANXUR2 (Precursor)
trEMBL	tr\|A0A022RMI3\|A0A022RMI3_ERYGU	2E-88	Uncharacterized protein {ECO:0000313\|EMBL:EYU40180.1}
TAIR10	AT3G51550.1	5E-81	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000006	gene	59388385	59392737	-
GWHAAZE00000006	mRNA	59388385	59392737	-
GWHAAZE00000006	exon	59391978	59392737	-
GWHAAZE00000006	exon	59391194	59391874	-
GWHAAZE00000006	exon	59390639	59390716	-
GWHAAZE00000006	exon	59390406	59390528	-
GWHAAZE00000006	exon	59389926	59390109	-
GWHAAZE00000006	exon	59388856	59389024	-
GWHAAZE00000006	exon	59388385	59388573	-
GWHAAZE00000006	CDS	59391978	59392737	-
GWHAAZE00000006	CDS	59391194	59391874	-
GWHAAZE00000006	CDS	59390639	59390716	-
GWHAAZE00000006	CDS	59390406	59390528	-
GWHAAZE00000006	CDS	59389926	59390109	-
GWHAAZE00000006	CDS	59388856	59389024	-
GWHAAZE00000006	CDS	59388385	59388573	-

Transcript Sequence
>GWHTAAZE021701 ATGTTCCTCCACAATCCATCTTTTACATTTGCCAATAACATCCCCACTCCCTACACCTGCTTCCCACTTGATACCATTCCGGTTCAATACCATTGTTTTCATCATAATGTTGCCGGTCTGAACCCGAACCCTAACCCTGTGTTTTCACTTCCACGTACTTCGTTATATTCGCCTCCAAAACCACGGAAATGGCTATTAGCTTTCGGCCGTGGGAATGCAATTGCAACTGTTGTGATAATTGTGATCACTCTGTTGGATATAATTGTTTACAAGCTGCGGCAGCTTCAAGAAACGAACTCTGGCGAGAAATTAACGGCGTCGACTTCACTGCCATCGGGGCAATTGTGTCGGCGCTTCTCACTTGCTGAGATTCTATCTGCAACACACAATTTTGATGAATCGTTGGTAATTGGGAGTGGTGGGTTTGGAAAGGTGTATAAAGGGATCATCGACAATGAGGGAAGTACCGTAGCCATAAAGCGGTTAAATTCTATGTCAAAGCAAGGTGCTGCTGAGTTTTGGACAGAGATTGCAATGTTGTCCAAATATCGGCATAGTCACCTTGTGTCTTTGCTTGGCTACTGTGACAATTACTATGAGATGATCCTTGTTTACGAGTATATGGTAAACGGAACCTTAGCTGATCACTTATATAAAATTGTTAGAAATGGTGGTAGTGATTCTCCGTTAACTTGGGTTCAACGCCTCAAGATATGCATAGGTGCTGCACGCGGACTTGACTACCTTCATACGGGTACGGGTCCGGCTAACCAGCCTTGCACACATGTCAGCACCCATGTTAAGGGCACGTTTGGGTATGTGGACCCGGAGTATTTCTTGACCCGTAGACTGACGAGGAAATCGGATGTGTACTCTTTTGGGGTTGTATTGCTTGAAGTGCTCTGTGGTAGGCCTTCTGTGGATTCAGGTCTCCACGAGGACCAAAGGGGTTTAGCCCGGTGGGCTCAACACTGCATCAAAGAAGGAAATGTTGAGCGAATTGTCGATCCTAATATTAGGGGAATCATCTTGTCAAATTGTTTGTCAGCATTTGTGCAAATAGCAGACCAGTGCTTAGATATTCTTCCCAAAAAGCGCCCTACGATGGCTGAGGTTGTGGCCTGGCTCGAGTTTGCACTGTCATTGCAAGAGAGAAGGGATTCTATGATATACGATGAGGAGATTTTTAATGGGGTTCACAATAGCCAAGAGCATCCAGAATCTTCTTCAAATAGGGAGATTATTATTGATGACAATGGTGAAAATCATGGGGAGAAAATTGATGAGACTGAAGTGTTGGGTGATGCAAAATATGGGCAATCTTCGCCCGCCTGTTTAGATGATTCAAGTGGTGGGCAGTTTAACATAAAGGAAGCCAAAAGATTGACAGTCAGAAAGAAAGTGCAGCTGTTTATTTCAAACACATCTAGGATAATATTGGAGAAGGTGAGAGGAGTTGAAAACTGCTGGTGGAAGAGCGAAAATGATCTCCCAAGTACCAATATTCCATCCGGTCAAGGCCATGGTGGTGGTGGTCTAGAGCTATTGAGGGATACAAAAAGCAACAATAACAATGGCGTCAAAGATGGAAGTGTTGTCCAGCTTGTTCCTCCGAGTCGGCAAATTGCGACTCCCAAGCCAGATATGGTGCTGGGCAAGGGAGGTTTTGGAAGGGTTTTCATAGGTTGGGTTAACGAGAAGACATATTCCCCCTCAAAACATGGAATCGGAATGGCCGTGGCTGTTAAGAGATTCAGTCGAGAAGGCTTAATGGGATTTAAAGAGTGGCAGGTAAATCAACTTCCATATTGCTCTTCCTTTGTAGGCAGTCTGAGTAATATATATGTGACATTTGCAGGAGGTGAAGAACCACTTTCATGGGAGACACGGCTTAGAATAGCAATAGGAGCAGCCCGGGGCCTTTCTTTCTTGCACACAAATAAGCCTGCTATGATACACCGTGATGTTAAGCCCTCTAACATATTGCTGGATAGGATTAATCCTTATCTTGTGAATTTTTTCATTGTCCAGGATTTTAATGCGAAGCTTTCAGATTTTGGATTGGCGAGGCTTGCTCCACAAGGAGACGAAACACACGTTTCAACACGCATTATAGGAACATTTGGTCACTTAGCTCCTGAGTACATATACACTGGTAATTTATTTTTTCCCATGTATTGGTAG

Network for GWHGAAZE021677

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07714.18	PK_Tyr_Ser-Thr	136	251	1.10E-20
PF00069.26	Pkinase	264	374	2.70E-09
PF00069.26	Pkinase	632	716	5.00E-13

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding
GO:0004674	molecular_function	protein serine/threonine kinase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	1.098
	SRR3591706	second leaf	0.229
	SRR3591707	mature leaf	0.217
	SRR3591708	Shoot apex	2.046
	SRR3591709	Stem	0.543
	SRR3591710	White floral bud	0.485
	SRR3591711	White flower	1.074
	SRR3591712	Green floral bud	0.709
	SRR3591713	Yellow flower	1.134
SRP173429	SRR8316895	Juvenile bud stage	6.261
	SRR8316896	Juvenile bud stage	8.242
	SRR8316897	Juvenile bud stage	2.314
	SRR8316894	Third green stage	1.787
	SRR8316900	Third green stage	2.778
	SRR8316901	Third green stage	2.667
	SRR8316898	Complete white stage	0.294
	SRR8316899	Complete white stage	10.495
	SRR8316903	Complete white stage	1.153
	SRR8316902	Silver flowering stage	0.697
	SRR8316904	Silver flowering stage	1.204
	SRR8316905	Silver flowering stage	0.488
	SRR8316906	Gold flowering stage	2.583
	SRR8316907	Gold flowering stage	1.868
	SRR8316908	Gold flowering stage	2.222
SRP132670	SRR6706286	Control	2.932
	SRR6706287	Light intensity 50%	4.947
	SRR6706288	Light intensity 20%	3.306
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	3.397
	CNS0095593	Slightly white alabastrum(diploid) 2	3.186
	CNS0095594	Slightly white alabastrum(diploid) 3	4.032
	CNS0095595	Whole white alabastrum(diploid) 2	2.993
	CNS0095596	Whole white alabastrum(diploid) 3	0.547
	CNS0095597	Whole white alabastrum(diploid) 4	2.207
	CNS0095598	Silvery flower (diploied) 1	8.832
	CNS0095599	Silvery flower (diploied) 2	5.168
	CNS0095600	Silvery flower (diploied) 3	3.889
	CNS0095601	Golden flower (diploid) 1	6.664
	CNS0095602	Golden flower (diploid) 2	5.979
	CNS0095603	Golden flower (diploid) 3	6.669
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.808
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.475
	CNS0095606	Slightly white alabastrum(tetraploid) 3	2.690
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.406
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.217
	CNS0095609	Whole white alabastrum(tetraploid) 3	1.408
	CNS0095610	Silvery flower (tetraploid) 1	2.211
	CNS0095611	Silvery flower (tetraploid) 2	1.519
	CNS0095612	Silvery flower (tetraploid) 3	1.244
	CNS0095613	Golden flower (tetraploid) 1	1.081
	CNS0095614	Golden flower (tetraploid) 2	2.343
	CNS0095615	Golden flower (tetraploid) 3	0.999
CRA001975	CRR073297	Stem 1	4.444
	CRR073298	Stem 2	2.858
	CRR073299	Stem 3	1.479
	CRR073300	Leaf 1	3.917
	CRR073301	Leaf 2	2.416
	CRR073302	Leaf 3	1.859
	CRR073303	Juvenile bud 1	1.466
	CRR073304	Juvenile bud 2	1.339
	CRR073305	Juvenile bud 3	1.965
	CRR073306	Third green 1	1.052
	CRR073307	Third green 2	0.428
	CRR073308	Third green 3	0.890
	CRR073309	Second white 1	0.494
	CRR073310	Second white 2	0.290
	CRR073311	Second white 3	0.233
	CRR073312	Silver flowering 1	1.478
	CRR073313	Silver flowering 2	1.513
	CRR073314	Silver flowering 3	0.574
	CRR073315	Gold flowering 1	1.251
	CRR073316	Gold flowering 2	4.809
	CRR073317	Gold flowering 3	1.333
	CRR073318	Tawny withering 1	1.290
	CRR073319	Tawny withering 2	2.796
	CRR073320	Tawny withering 3	1.658