Detail information of GWHGAAZE021665


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAAF79541.1AC023673_290F21D18.6 [Arabidopsis thaliana]
COGYP_002508747.14E-12protein kinase
Swissprottr|Q41328|PTI1_SOLLC3E-123Pto-interacting protein 1
trEMBLtr|Q9LNH4|Q9LNH4_ARATH0F21D18.6 {ECO:0000313|EMBL:AAF79541.1}
TAIR10AT3G17410.19E-102Protein kinase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene5920323859216089-
GWHAAZE00000006mRNA5920323859216089-
GWHAAZE00000006exon5920323859203691-
GWHAAZE00000006exon5920409359204318-
GWHAAZE00000006exon5920478559205046-
GWHAAZE00000006exon5920604459206170-
GWHAAZE00000006exon5920626059206546-
GWHAAZE00000006exon5920877059208881-
GWHAAZE00000006exon5920906259209151-
GWHAAZE00000006exon5920926759209519-
GWHAAZE00000006exon5921002359210284-
GWHAAZE00000006exon5921133159211457-
GWHAAZE00000006exon5921154759211833-
GWHAAZE00000006exon5921505159215377-
GWHAAZE00000006exon5921562459216089-
GWHAAZE00000006CDS5921562459216089-
GWHAAZE00000006CDS5921505159215377-
GWHAAZE00000006CDS5921154759211833-
GWHAAZE00000006CDS5921133159211457-
GWHAAZE00000006CDS5921002359210284-
GWHAAZE00000006CDS5920926759209519-
GWHAAZE00000006CDS5920906259209151-
GWHAAZE00000006CDS5920877059208881-
GWHAAZE00000006CDS5920626059206546-
GWHAAZE00000006CDS5920604459206170-
GWHAAZE00000006CDS5920478559205046-
GWHAAZE00000006CDS5920409359204318-
GWHAAZE00000006CDS5920356059203691-
GWHAAZE00000006three_prime_UTR5920323859203559-
Transcript Sequence

Network for GWHGAAZE021665

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.18PK_Tyr_Ser-Thr401544.00E-18
PF07714.18PK_Tyr_Ser-Thr3234941.20E-21
PF07714.18PK_Tyr_Ser-Thr5386307.70E-08
PF07714.18PK_Tyr_Ser-Thr7009293.10E-29
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_RLCK-VIII

KEGG pathway

KO Enzyme pathway mapID
K13436PTI1 Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf3.961
SRR3591706second leaf4.173
SRR3591707mature leaf7.424
SRR3591708Shoot apex3.648
SRR3591709Stem5.684
SRR3591710White floral bud0.990
SRR3591711White flower1.131
SRR3591712Green floral bud0.900
SRR3591713Yellow flower1.049
SRP173429 SRR8316895Juvenile bud stage 4.546
SRR8316896Juvenile bud stage 5.709
SRR8316897Juvenile bud stage 2.152
SRR8316894Third green stage 2.610
SRR8316900Third green stage 4.804
SRR8316901Third green stage 4.733
SRR8316898Complete white stage 1.907
SRR8316899Complete white stage 5.649
SRR8316903Complete white stage 3.562
SRR8316902Silver flowering stage2.701
SRR8316904Silver flowering stage4.100
SRR8316905Silver flowering stage1.860
SRR8316906Gold flowering stage 8.943
SRR8316907Gold flowering stage 5.399
SRR8316908Gold flowering stage 5.089
SRP132670SRR6706286Control4.154
SRR6706287Light intensity 50%4.219
SRR6706288Light intensity 20%3.799
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.029
CNS0095593Slightly white alabastrum(diploid) 24.281
CNS0095594Slightly white alabastrum(diploid) 33.956
CNS0095595Whole white alabastrum(diploid) 23.446
CNS0095596Whole white alabastrum(diploid) 32.520
CNS0095597Whole white alabastrum(diploid) 42.522
CNS0095598Silvery flower (diploied) 15.331
CNS0095599Silvery flower (diploied) 25.639
CNS0095600Silvery flower (diploied) 35.464
CNS0095601Golden flower (diploid) 14.863
CNS0095602Golden flower (diploid) 27.188
CNS0095603Golden flower (diploid) 36.979
CNS0095604Slightly white alabastrum(tetraploid) 13.131
CNS0095605Slightly white alabastrum(tetraploid) 22.746
CNS0095606Slightly white alabastrum(tetraploid) 35.569
CNS0095607Whole white alabastrum(tetraploid) 11.375
CNS0095608Whole white alabastrum(tetraploid) 21.495
CNS0095609Whole white alabastrum(tetraploid) 33.219
CNS0095610Silvery flower (tetraploid) 13.174
CNS0095611Silvery flower (tetraploid) 23.196
CNS0095612Silvery flower (tetraploid) 32.729
CNS0095613Golden flower (tetraploid) 11.841
CNS0095614Golden flower (tetraploid) 23.050
CNS0095615Golden flower (tetraploid) 31.594
CRA001975CRR073297Stem 15.160
CRR073298Stem 24.961
CRR073299Stem 32.736
CRR073300Leaf 14.917
CRR073301Leaf 24.366
CRR073302Leaf 33.456
CRR073303Juvenile bud 12.966
CRR073304Juvenile bud 21.039
CRR073305Juvenile bud 32.858
CRR073306Third green 10.338
CRR073307Third green 20.442
CRR073308Third green 30.338
CRR073309Second white 10.684
CRR073310Second white 20.752
CRR073311Second white 30.540
CRR073312Silver flowering 12.076
CRR073313Silver flowering 21.822
CRR073314Silver flowering 31.033
CRR073315Gold flowering 12.788
CRR073316Gold flowering 25.116
CRR073317Gold flowering 31.913
CRR073318Tawny withering 16.314
CRR073319Tawny withering 26.183
CRR073320Tawny withering 34.200