Gene detail

Detail information of GWHGAAZE021663

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU44215.1	8.9942E-127	hypothetical protein MIMGU_mgv1a000477mg [Erythranthe guttata]
COG	YP_004696643.1	2E-25	serine/threonine protein kinase
Swissprot	tr\|Q9SCZ4\|FERON_ARATH	2E-115	Receptor-like protein kinase FERONIA (Precursor)
trEMBL	tr\|A0A022RZ14\|A0A022RZ14_ERYGU	3E-127	Uncharacterized protein {ECO:0000313\|EMBL:EYU44215.1}
TAIR10	AT3G51550.1	3E-98	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000006	gene	59176173	59185607	-
GWHAAZE00000006	mRNA	59176173	59185607	-
GWHAAZE00000006	exon	59184554	59185607	-
GWHAAZE00000006	exon	59176173	59176525	-
GWHAAZE00000006	CDS	59184554	59185607	-
GWHAAZE00000006	CDS	59176173	59176525	-

Transcript Sequence
>GWHTAAZE021687 ATGCAGTCGGTTCAAGAATCAAATCCCGGTAAGAAATTTAATCCATCCTCTTCATTGCCGCCAGAAAATCTATCCCGTCGGTTTTCGCTTGATGAGATCTTAACGGCCACAAATGATTTCGACGATTCGTTGGTCATTGGCCAAGGGGGGTTTGCAAAGGTTTACAAAGGGGAAATTGATAATGGGATTCTTACTGTTGCCATAAAGCGAATGAAGCCTATGTTTAAAGAAGGCGCCCCTGAGTTTCGTTCAGAGATTTTGATGGTGTCCAAATTTCGACACAGTCATCTCGTCTCTCTCATTGGTTACTGTGAGAGCGAAAATGAAATGATCCTTGTATACGAATATATGGCCCGTGGGACTCTAGAAGATAATTTGCATAAAATCGGTACAAGTGGAAATAACAATCTTCCTCTAAGTTGGGTCCAACGCCTTAAAATATGTATTGGTGCTGCTCGGGGGCTAGAGTACCTTCATACTGGTACTGGTATCCAGCACAGAGTTATTCATCGCGATGTTAAGAGTTCAAATATTTTGTTGGATGAGAATTGGGCAGCTAAAATCTCGGATTTTGGGATGTCAAAAATAGGTCCAGCAAACCAGTCAGACACCCATGTCAGCACCCGAATTGTAGGTACATTTGGTTATTTGGATCCAGATTACGCTTTCACTGGTAGCCTCACTAGGAAATCCGATGTGTACTCCTTTGGGGTTGTACTATTTGAAGTGTTGTGTGGGAGGCCTGCCTTGGATCGAAGACTCCAAGAGGACCAACGGGGTTTAGCTGGGTGGGCGCAGTACTGTGTCAAAAAAGGGATAGTCAAGCAAATTATTGATCCCAATTTGAAGTCGCAAATTGTACCACGTAGTTTGTTGGCATTTGTGAAAGTTGCTGACCGATGCTTGCATGGTCGTCCAAAAGAACGCCCTACAATGAATGAGGTTCTGACTGATCTTGAGCTTGCTTTGAATTTGCAAGCAAGCACAAATGTTGCCAGTGGGTTTGCAGAAAAGTTCCGGTTGTTGTTTTCAGTCACACCTCGACCAATATCAGGTTTTGGAGTTGTGAACACAATTGCCATTGTAGTTACAGTTCTAATCACAGTACAGAATGTCCTTGTTTATAAGCTGCGGGAGCTTCAAGAATCAAATTTCCATGAGAAATTTAACCTATCGTCTTCATTGCCTTCCGAAAAACTATACCGTCGATTTTCACTTGCTGAGATCTTATCGACTACAAATCATTTCGATGATTCTCTGGTCATCGGCTGGGGCGGGTTTGGGAAGGTTTACACAGGGTCATTTGATAATGGGGATAATAATGCTGCTATAAAGCGAGTGGATTCTATGTCAAATCAAGGAGCCCCCAAATTTTGGACTGAGATTAATGTGCTCTCCAAATTTTGA

Network for GWHGAAZE021663

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07714.18	PK_Tyr_Ser-Thr	45	319	5.20E-45

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0005524	molecular_function	ATP binding
GO:0004672	molecular_function	protein kinase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.313
	SRR3591706	second leaf	0.280
	SRR3591707	mature leaf	0.329
	SRR3591708	Shoot apex	0.180
	SRR3591709	Stem	0.772
	SRR3591710	White floral bud	0.624
	SRR3591711	White flower	0.772
	SRR3591712	Green floral bud	0.247
	SRR3591713	Yellow flower	0.594
SRP173429	SRR8316895	Juvenile bud stage	0.665
	SRR8316896	Juvenile bud stage	1.842
	SRR8316897	Juvenile bud stage	0.446
	SRR8316894	Third green stage	0.592
	SRR8316900	Third green stage	1.647
	SRR8316901	Third green stage	0.840
	SRR8316898	Complete white stage	0.331
	SRR8316899	Complete white stage	1.456
	SRR8316903	Complete white stage	0.366
	SRR8316902	Silver flowering stage	0.375
	SRR8316904	Silver flowering stage	0.439
	SRR8316905	Silver flowering stage	0.136
	SRR8316906	Gold flowering stage	1.133
	SRR8316907	Gold flowering stage	0.466
	SRR8316908	Gold flowering stage	1.322
SRP132670	SRR6706286	Control	0.705
	SRR6706287	Light intensity 50%	0.943
	SRR6706288	Light intensity 20%	1.135
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.910
	CNS0095593	Slightly white alabastrum(diploid) 2	1.145
	CNS0095594	Slightly white alabastrum(diploid) 3	0.708
	CNS0095595	Whole white alabastrum(diploid) 2	0.427
	CNS0095596	Whole white alabastrum(diploid) 3	0.032
	CNS0095597	Whole white alabastrum(diploid) 4	0.674
	CNS0095598	Silvery flower (diploied) 1	0.797
	CNS0095599	Silvery flower (diploied) 2	0.337
	CNS0095600	Silvery flower (diploied) 3	0.382
	CNS0095601	Golden flower (diploid) 1	0.822
	CNS0095602	Golden flower (diploid) 2	0.621
	CNS0095603	Golden flower (diploid) 3	0.838
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.849
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.326
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.861
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.153
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.024
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.675
	CNS0095610	Silvery flower (tetraploid) 1	0.210
	CNS0095611	Silvery flower (tetraploid) 2	0.171
	CNS0095612	Silvery flower (tetraploid) 3	0.293
	CNS0095613	Golden flower (tetraploid) 1	0.027
	CNS0095614	Golden flower (tetraploid) 2	0.122
	CNS0095615	Golden flower (tetraploid) 3	0.088
CRA001975	CRR073297	Stem 1	2.514
	CRR073298	Stem 2	1.592
	CRR073299	Stem 3	0.645
	CRR073300	Leaf 1	3.041
	CRR073301	Leaf 2	2.178
	CRR073302	Leaf 3	0.668
	CRR073303	Juvenile bud 1	0.237
	CRR073304	Juvenile bud 2	0.144
	CRR073305	Juvenile bud 3	0.576
	CRR073306	Third green 1	0.004
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.049
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.038
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.131
	CRR073314	Silver flowering 3	0.162
	CRR073315	Gold flowering 1	0.037
	CRR073316	Gold flowering 2	0.215
	CRR073317	Gold flowering 3	0.003
	CRR073318	Tawny withering 1	0.590
	CRR073319	Tawny withering 2	0.495
	CRR073320	Tawny withering 3	0.611