Gene detail

Detail information of GWHGAAZE021646

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU44215.1	2.0824E-109	hypothetical protein MIMGU_mgv1a000477mg [Erythranthe guttata]
COG	YP_630897.1	2E-19	serine/threonine protein kinase
Swissprot	tr\|Q9SCZ4\|FERON_ARATH	4E-88	Receptor-like protein kinase FERONIA (Precursor)
trEMBL	tr\|A0A022RZ14\|A0A022RZ14_ERYGU	8E-110	Uncharacterized protein {ECO:0000313\|EMBL:EYU44215.1}
TAIR10	AT3G51550.1	1E-79	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000006	gene	58801238	58806250	-
GWHAAZE00000006	mRNA	58801238	58806250	-
GWHAAZE00000006	exon	58805173	58806250	-
GWHAAZE00000006	exon	58804121	58804443	-
GWHAAZE00000006	exon	58803880	58804006	-
GWHAAZE00000006	exon	58802677	58802695	-
GWHAAZE00000006	exon	58801874	58802039	-
GWHAAZE00000006	exon	58801498	58801584	-
GWHAAZE00000006	exon	58801238	58801369	-
GWHAAZE00000006	CDS	58805173	58806250	-
GWHAAZE00000006	CDS	58804121	58804443	-
GWHAAZE00000006	CDS	58803880	58804006	-
GWHAAZE00000006	CDS	58802677	58802695	-
GWHAAZE00000006	CDS	58801874	58802039	-
GWHAAZE00000006	CDS	58801498	58801584	-
GWHAAZE00000006	CDS	58801238	58801369	-

Transcript Sequence
>GWHTAAZE021670 ATGGTGTCACTTCATGAATCAAACGCTGGTGAGAAATTTAATCTATCGGAAGAGCCATGCCCTCGATTTTCACTTGTTGATATTGAAAAGGCCACAAATAATTTCACTTCTTTGGTCATCGGCGAGGGGGCGTGCGCCAAGGTTTACAAAGGAGAAATTGAAATTGATAAGGGGGGAGCTAATAGTACTACTGTTGCCATTAAGCGAATGGATTCTATGTCCCCTGAGTCTAGGAAAGAGTTTTGGCAAGAGATTTCAATGGTGTATAAATTTCGACATAGTCACCTCGTCTCCCTCATTGGTTACTGTGAGACCGACGAGGAAATGATACTGGTTTATGAATATATGGGCGGTGGAACTCTCAAAGATGCATTACATAAAAGTGGTATAAATGGCAACAATAACATTCTTCTAAGTTGGGTTGAACGCCTTAAGATAAGCGTTGGTGCTGCTCGGGGTTTACATTACCTTCATACTGGTACCGGTAACAAGCACAAAGTCATTCATCGCGATGTCAAGAGTTCAAATATATTGTTAGATGAAAATCGGAAAATAGCTAAAATATCAGATTTTGAACTGTTAAAAATAGGTCCAACAAACCAAACAGTCACCGGTGTGTTCACCAGAGTTGCAGGCACACGTGGTTATTGGGATCCAGACTACTATTCCACCGGTATCCTCACCAGTAAATCTGATGTTTACTCCTTTGGAGTTGTACTGTTTGAATTGTTGTGTGGGCGGCCTGCTTTGGATTTGACACTTGCTGATGAGGACCAATGGAACTTAGTAGCGTGGGCCCATCAATGTGTTGAAAAAGGAAAAGTTAAGCAAATTGTTGATCCCAATTTGAAGTCACAAATCTTACCTAGTAGTTTGTCGGCATTTGTGAAAATTGCGGAACGATGCTTGCATGTGCGTCGAGCACAACGCCCTACAATGACTAAGGTGCTGGCTGAGCTTGAGCGTGCTTTGAAATTACAAGAAAGTGGAAAAGTTGCCACAGGATACGATGTCTGGAGAAGGGAATACGCAGAGAAGTTGCGGCTGTTGTTTTCTGTTGCATGTCGGCCAATATTGGTTTATCAAGCCACAGAAGTTGCACCAATTGACACAGTGACTGCACCAGTTGATACAGCTGCACCAAATGTCACAGTGACTGCACCAACTGATACAGAGGCTGCACCAAATGACAACAAGGCTATAAAAATTAAGCCAGTTGGCAGCATCCCTTCTCTTCAGCTATATGAGTTGAAGGAAATAACTGACAACTTTAGTACGAAAGCTTTGATTTGCGATGGCACTTGCGGAAAATTATACCATGGTATCTTGAAAAGTGGGCAGGCTTCATGCATCAAAATGTTGGAGTTCAATAAGCTTCCACTCCAAGACTTTTTATCACAGGTTCACACAGTATCAAGGCTTAAACATGAAAATGTGGTTGAGCTACTTGGTTATTGCATTGATGTTGATCTCCGTTTCCTTGCATATGAGTATGCTCCAAATGGATCTCTTCATGACATTCTTCACCATCATTTTGTTGCTCCGAAATTTAACAGATCTACAATAATTACTACACGACGAAATTCAAGGAGTGAAAAATTGAGATCAAAGCGTGATGTTTTCATGTTCGGCGTGGTCCTCTTGGAACTGTTGACCGGGCGTAAAGCTGTTGATTATACACTGCCACGTTCACAACAGAATCTGATCAGATGGGTAACTCCAAAACTAAACTATTATAGAGTTAACGAGTGCATTGACCCCAGATTAAACGGAGAATACCCTCTCCGGCAAGCTGCAGAGATGGCCGCCATTGCAGCCTCGTGTGTGCAGTGTGAACCCGTACTGCGTCCGTCCATGAGCATTGTAGTGAATCGCCTCCAACCCCTGCTGAATGATTTGCCTGGACCTAGCAGTGAAGCAACACACTTGTGA

Network for GWHGAAZE021646

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07714.18	PK_Tyr_Ser-Thr	39	320	3.00E-43
PF07714.18	PK_Tyr_Ser-Thr	428	511	2.60E-09

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.374
	SRR3591706	second leaf	0.139
	SRR3591707	mature leaf	0.051
	SRR3591708	Shoot apex	0.134
	SRR3591709	Stem	0.371
	SRR3591710	White floral bud	0.000
	SRR3591711	White flower	0.173
	SRR3591712	Green floral bud	0.083
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.099
	SRR8316896	Juvenile bud stage	0.112
	SRR8316897	Juvenile bud stage	0.000
	SRR8316894	Third green stage	0.000
	SRR8316900	Third green stage	0.000
	SRR8316901	Third green stage	0.062
	SRR8316898	Complete white stage	0.026
	SRR8316899	Complete white stage	0.000
	SRR8316903	Complete white stage	0.131
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.042
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	0.097
	SRR6706287	Light intensity 50%	0.066
	SRR6706288	Light intensity 20%	0.054
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.023
	CNS0095593	Slightly white alabastrum(diploid) 2	0.005
	CNS0095594	Slightly white alabastrum(diploid) 3	0.000
	CNS0095595	Whole white alabastrum(diploid) 2	0.037
	CNS0095596	Whole white alabastrum(diploid) 3	0.104
	CNS0095597	Whole white alabastrum(diploid) 4	0.000
	CNS0095598	Silvery flower (diploied) 1	0.139
	CNS0095599	Silvery flower (diploied) 2	0.000
	CNS0095600	Silvery flower (diploied) 3	0.000
	CNS0095601	Golden flower (diploid) 1	0.000
	CNS0095602	Golden flower (diploid) 2	0.000
	CNS0095603	Golden flower (diploid) 3	0.124
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.033
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.104
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.046
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.000
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.061
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.103
	CNS0095610	Silvery flower (tetraploid) 1	0.337
	CNS0095611	Silvery flower (tetraploid) 2	0.303
	CNS0095612	Silvery flower (tetraploid) 3	0.421
	CNS0095613	Golden flower (tetraploid) 1	0.121
	CNS0095614	Golden flower (tetraploid) 2	0.263
	CNS0095615	Golden flower (tetraploid) 3	0.066
CRA001975	CRR073297	Stem 1	0.139
	CRR073298	Stem 2	0.000
	CRR073299	Stem 3	0.007
	CRR073300	Leaf 1	0.032
	CRR073301	Leaf 2	0.043
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.045
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.004
	CRR073306	Third green 1	0.066
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.068
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000