Gene detail

Detail information of GWHGAAZE021644

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011071327.1	5.8371E-131	PREDICTED: pto-interacting protein 1 isoform X2 [Sesamum indicum]
COG	YP_007945910.1	8E-16	protein kinase family protein with PASTA domain
Swissprot	tr\|Q41328\|PTI1_SOLLC	3E-131	Pto-interacting protein 1
trEMBL	tr\|M1A0F2\|M1A0F2_SOLTU	2E-129	Uncharacterized protein {ECO:0000313\|EnsemblPlants:PGSC0003DMT400011941}
TAIR10	AT3G17410.1	4E-101	Protein kinase superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000006	gene	58766838	58773345	+
GWHAAZE00000006	mRNA	58766838	58773345	+
GWHAAZE00000006	exon	58766838	58766850	+
GWHAAZE00000006	exon	58767023	58767360	+
GWHAAZE00000006	exon	58768102	58768237	+
GWHAAZE00000006	exon	58769257	58769327	+
GWHAAZE00000006	exon	58770678	58770839	+
GWHAAZE00000006	exon	58770930	58771056	+
GWHAAZE00000006	exon	58771582	58771858	+
GWHAAZE00000006	exon	58772501	58772633	+
GWHAAZE00000006	exon	58772944	58773033	+
GWHAAZE00000006	exon	58773253	58773345	+
GWHAAZE00000006	CDS	58766838	58766850	+
GWHAAZE00000006	CDS	58767023	58767360	+
GWHAAZE00000006	CDS	58768102	58768237	+
GWHAAZE00000006	CDS	58769257	58769327	+
GWHAAZE00000006	CDS	58770678	58770839	+
GWHAAZE00000006	CDS	58770930	58771056	+
GWHAAZE00000006	CDS	58771582	58771858	+
GWHAAZE00000006	CDS	58772501	58772633	+
GWHAAZE00000006	CDS	58772944	58773033	+
GWHAAZE00000006	CDS	58773253	58773345	+

Transcript Sequence
>GWHTAAZE021668 ATGATAGGAGCAAGTAAATCGCCCCCAACTCCGTCTCTTTTTTATTCTCCTCCTCTTGTTGTTGATGATGATTATCATAATAACAATCACCCTCTGAATTCGCTTCCAAAGCCACGAACATGGCTACTAGGTTTTGGTACTGTCAACACAATTGCCACTGTGGTGAGAATCCTACTCACTCTATTGAATATCCTTGTTTATAAGCTAAGCCAGGTTCATGAAGTTAATTTCGCCAAGAAAGCTTATGCATCTTCTTCTTTGCCATCGGAAAATAAGCTATGCCGTCCATTTTCATTTGCTGAGATCTTATCGGCCACTAACCATTTTGATGATTCTTTGGTCATTGGTCGGATTGCAGACAAATGCTTGCATGTTTGTCCCAAGGAACGCCCTACAATGACTGAGGTTGTGGCTGAGCTTGAGTTTGCTCTTACATTACAAGAGAGAAGGGATTGTTCTATGGCAGAGGAGTATATTTTTAATGATGGTAATAATGCAGGTTATTATACCACAGAGGCACCAAATGACACAGTGACTGCACTAAATGGCGAGCAGGCTCTAGATGAGTTGAAGGAAATAACAGAAAACTTTGGTCCAAAATCTTTGATTTGTGAGGGGACTAGTGGAAAATTATATAATGGTAACTTGAAAAGTGGGGAGGCTTCATGCATCAAAAAGTTAGATTTCAATAAGCTTCCAGATCACGAATTTTTAGCACAGGTATCTATGGTATCAAGGCTTAAACATGAAAATGTGGTTGAGCTGCTCAGTTATTGCATTGATGGTGGTCTCCATCTCATTGCGTATGAGTATGCTCCGAATGGATCTCTTCATGACATTCTTCATGGACAAAAAGGTATCAAAGATGCACAGCCAGGTCCAGTTCTGTCATGGCCCCAAAGAGTTAAAATTGCCCTTGAAGCTGCGAAAGGACTTGAATACTTGCATGAAGATGCACAACCCCATATCATCCATCGTGCTATGAAGTCCAGCAATGTCTTACTTTTTAATGATGGCATCGCAAAGATAGCAGATATTATATTTTCATATCAAGCCCTGGACATACCTTTTAAAACTACTTGGTATTTCGGAGTGGGTGGGCGATTTGGCTGTGATGCTCCTGAGTTTGCAATGACTGAACAATGGAGTTCAAAGTGTGACGTCTACAGGTTTGGCGTGGTCCTCTTGGAACTGTTGACGGGGAGTAAACCTTATGAGTCTACACGGCCACTTGAACAACAGAGGCTGGTGACATGGGTAATTCCAAAACTTACTGAAGAAAAACTGAAGCAATGTATTGACCCTATATTGAATGGAGAATACCCACCCAGACAAGCTGCTCAGGTAATGGCTGCCGTTGCGGCCTTGTGCTTGCAATATGAACCTGATTTGAGGTTGAGCATGAGAATAGTGGTTAAAGTCCTCCAGTCTCTGCTGTGA

Network for GWHGAAZE021644

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07714.18	PK_Tyr_Ser-Thr	203	474	9.40E-31

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_RLCK-VIII

KEGG pathway

KO	Enzyme	pathway	mapID
K13436	PTI1	Plant-pathogen interaction	map04626

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.100
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	0.034
	SRR3591711	White flower	0.000
	SRR3591712	Green floral bud	0.000
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.094
	SRR8316896	Juvenile bud stage	0.202
	SRR8316897	Juvenile bud stage	0.666
	SRR8316894	Third green stage	0.043
	SRR8316900	Third green stage	0.018
	SRR8316901	Third green stage	0.024
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.035
	SRR8316903	Complete white stage	0.106
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.020
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.013
	SRR8316908	Gold flowering stage	0.060
SRP132670	SRR6706286	Control	0.088
	SRR6706287	Light intensity 50%	0.034
	SRR6706288	Light intensity 20%	0.030
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.330
	CNS0095593	Slightly white alabastrum(diploid) 2	0.117
	CNS0095594	Slightly white alabastrum(diploid) 3	0.218
	CNS0095595	Whole white alabastrum(diploid) 2	0.000
	CNS0095596	Whole white alabastrum(diploid) 3	0.010
	CNS0095597	Whole white alabastrum(diploid) 4	0.017
	CNS0095598	Silvery flower (diploied) 1	0.223
	CNS0095599	Silvery flower (diploied) 2	0.083
	CNS0095600	Silvery flower (diploied) 3	0.005
	CNS0095601	Golden flower (diploid) 1	0.000
	CNS0095602	Golden flower (diploid) 2	0.041
	CNS0095603	Golden flower (diploid) 3	0.041
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.483
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.723
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.340
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.536
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.162
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.339
	CNS0095610	Silvery flower (tetraploid) 1	0.021
	CNS0095611	Silvery flower (tetraploid) 2	0.109
	CNS0095612	Silvery flower (tetraploid) 3	0.032
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.162
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.015
	CRR073298	Stem 2	0.000
	CRR073299	Stem 3	0.000
	CRR073300	Leaf 1	0.000
	CRR073301	Leaf 2	0.000
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.009
	CRR073320	Tawny withering 3	0.000