Detail information of GWHGAAZE021636


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006354974.17.0004E-174PREDICTED: receptor-like protein kinase FERONIA-like [Solanum tuberosum]
COGYP_008151634.17E-21hypothetical protein SCE1572_26190
Swissprottr|Q94F62|BAK1_ARATH2E-159BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 (Precursor)
trEMBLtr|M1APN7|M1APN7_SOLTU3E-174Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400027429}
TAIR10AT4G33430.14E-125BRI1-associated receptor kinase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene5864917658654076-
GWHAAZE00000006mRNA5864917658654076-
GWHAAZE00000006exon5864917658649396-
GWHAAZE00000006exon5865006658650460-
GWHAAZE00000006exon5865226958652604-
GWHAAZE00000006exon5865282058652873-
GWHAAZE00000006exon5865295158654076-
GWHAAZE00000006CDS5865295158654076-
GWHAAZE00000006CDS5865282058652873-
GWHAAZE00000006CDS5865226958652604-
GWHAAZE00000006CDS5865006658650460-
GWHAAZE00000006CDS5864924158649396-
GWHAAZE00000006three_prime_UTR5864917658649240-
Transcript Sequence

Network for GWHGAAZE021636

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0120GO:0006468 protein phosphorylation GOslim:biological_process
Protein Kinases RLK-Pelle_LRR-II family Protein Kinases RLK-Pelle_LRR-II
GO:0004672 protein kinase activity GOslim:molecular_function
GO:0005524 ATP binding GOslim:molecular_function
Protein Kinases RLK-Pelle_CrRLK1L-1 family Protein Kinases RLK-Pelle_CrRLK1L-1


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.18PK_Tyr_Ser-Thr303122.70E-46
PF00069.26Pkinase4206841.50E-41
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_LRR-II

KEGG pathway

KO Enzyme pathway mapID
K13416BAK1 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075
Plant-pathogen interactionmap04626

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.441
SRR3591706second leaf0.368
SRR3591707mature leaf0.892
SRR3591708Shoot apex0.224
SRR3591709Stem0.878
SRR3591710White floral bud0.585
SRR3591711White flower0.984
SRR3591712Green floral bud1.477
SRR3591713Yellow flower0.393
SRP173429 SRR8316895Juvenile bud stage 1.042
SRR8316896Juvenile bud stage 2.115
SRR8316897Juvenile bud stage 0.065
SRR8316894Third green stage 0.705
SRR8316900Third green stage 1.310
SRR8316901Third green stage 1.650
SRR8316898Complete white stage 0.156
SRR8316899Complete white stage 2.571
SRR8316903Complete white stage 0.263
SRR8316902Silver flowering stage0.087
SRR8316904Silver flowering stage0.058
SRR8316905Silver flowering stage0.016
SRR8316906Gold flowering stage 0.217
SRR8316907Gold flowering stage 0.019
SRR8316908Gold flowering stage 0.012
SRP132670SRR6706286Control2.133
SRR6706287Light intensity 50%1.665
SRR6706288Light intensity 20%2.077
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.412
CNS0095593Slightly white alabastrum(diploid) 21.490
CNS0095594Slightly white alabastrum(diploid) 32.763
CNS0095595Whole white alabastrum(diploid) 20.560
CNS0095596Whole white alabastrum(diploid) 30.318
CNS0095597Whole white alabastrum(diploid) 40.344
CNS0095598Silvery flower (diploied) 11.075
CNS0095599Silvery flower (diploied) 21.516
CNS0095600Silvery flower (diploied) 30.212
CNS0095601Golden flower (diploid) 10.972
CNS0095602Golden flower (diploid) 21.169
CNS0095603Golden flower (diploid) 31.208
CNS0095604Slightly white alabastrum(tetraploid) 10.016
CNS0095605Slightly white alabastrum(tetraploid) 20.045
CNS0095606Slightly white alabastrum(tetraploid) 30.128
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.043
CNS0095610Silvery flower (tetraploid) 10.006
CNS0095611Silvery flower (tetraploid) 20.002
CNS0095612Silvery flower (tetraploid) 30.078
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.002
CNS0095615Golden flower (tetraploid) 30.006
CRA001975CRR073297Stem 11.987
CRR073298Stem 22.037
CRR073299Stem 32.040
CRR073300Leaf 11.799
CRR073301Leaf 21.625
CRR073302Leaf 32.009
CRR073303Juvenile bud 11.365
CRR073304Juvenile bud 20.644
CRR073305Juvenile bud 31.706
CRR073306Third green 10.202
CRR073307Third green 20.170
CRR073308Third green 30.027
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.076
CRR073312Silver flowering 10.026
CRR073313Silver flowering 20.093
CRR073314Silver flowering 30.000
CRR073315Gold flowering 12.357
CRR073316Gold flowering 22.917
CRR073317Gold flowering 32.577
CRR073318Tawny withering 14.753
CRR073319Tawny withering 22.767
CRR073320Tawny withering 31.951