Detail information of GWHGAAZE021617


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrEYU44215.15.0869E-116hypothetical protein MIMGU_mgv1a000477mg [Erythranthe guttata]
COGYP_008151634.13E-22hypothetical protein SCE1572_26190
Swissprottr|Q9FID8|Y5900_ARATH7E-100Putative receptor-like protein kinase At5g39000 (Precursor)
trEMBLtr|A0A022RZ14|A0A022RZ14_ERYGU2E-116Uncharacterized protein {ECO:0000313|EMBL:EYU44215.1}
TAIR10AT5G39000.11E-87Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene5809165658093282-
GWHAAZE00000006mRNA5809165658093282-
GWHAAZE00000006exon5809215758093282-
GWHAAZE00000006exon5809165658091810-
GWHAAZE00000006CDS5809215758093282-
GWHAAZE00000006CDS5809165658091810-
Transcript Sequence

Network for GWHGAAZE021617

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0120GO:0006468 protein phosphorylation GOslim:biological_process
Protein Kinases RLK-Pelle_LRR-II family Protein Kinases RLK-Pelle_LRR-II
GO:0004672 protein kinase activity GOslim:molecular_function
GO:0005524 ATP binding GOslim:molecular_function
Protein Kinases RLK-Pelle_CrRLK1L-1 family Protein Kinases RLK-Pelle_CrRLK1L-1


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.18PK_Tyr_Ser-Thr303121.30E-47
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_CrRLK1L-1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.930
SRR3591706second leaf0.579
SRR3591707mature leaf1.389
SRR3591708Shoot apex0.200
SRR3591709Stem0.908
SRR3591710White floral bud0.410
SRR3591711White flower1.705
SRR3591712Green floral bud2.577
SRR3591713Yellow flower0.286
SRP173429 SRR8316895Juvenile bud stage 1.510
SRR8316896Juvenile bud stage 3.092
SRR8316897Juvenile bud stage 0.116
SRR8316894Third green stage 1.003
SRR8316900Third green stage 2.139
SRR8316901Third green stage 2.548
SRR8316898Complete white stage 0.329
SRR8316899Complete white stage 3.116
SRR8316903Complete white stage 0.733
SRR8316902Silver flowering stage0.030
SRR8316904Silver flowering stage0.148
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.374
SRR8316907Gold flowering stage 0.699
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control2.378
SRR6706287Light intensity 50%2.250
SRR6706288Light intensity 20%2.650
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.389
CNS0095593Slightly white alabastrum(diploid) 21.350
CNS0095594Slightly white alabastrum(diploid) 32.968
CNS0095595Whole white alabastrum(diploid) 21.041
CNS0095596Whole white alabastrum(diploid) 30.260
CNS0095597Whole white alabastrum(diploid) 40.317
CNS0095598Silvery flower (diploied) 12.095
CNS0095599Silvery flower (diploied) 21.520
CNS0095600Silvery flower (diploied) 30.532
CNS0095601Golden flower (diploid) 12.114
CNS0095602Golden flower (diploid) 20.751
CNS0095603Golden flower (diploid) 31.159
CNS0095604Slightly white alabastrum(tetraploid) 10.000
CNS0095605Slightly white alabastrum(tetraploid) 20.001
CNS0095606Slightly white alabastrum(tetraploid) 30.133
CNS0095607Whole white alabastrum(tetraploid) 10.112
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.127
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.009
CNS0095612Silvery flower (tetraploid) 30.009
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.040
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 14.411
CRR073298Stem 23.793
CRR073299Stem 32.258
CRR073300Leaf 12.379
CRR073301Leaf 22.616
CRR073302Leaf 31.950
CRR073303Juvenile bud 12.579
CRR073304Juvenile bud 20.990
CRR073305Juvenile bud 31.344
CRR073306Third green 10.031
CRR073307Third green 20.121
CRR073308Third green 30.046
CRR073309Second white 10.123
CRR073310Second white 20.052
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.252
CRR073314Silver flowering 30.000
CRR073315Gold flowering 13.894
CRR073316Gold flowering 23.349
CRR073317Gold flowering 34.608
CRR073318Tawny withering 14.947
CRR073319Tawny withering 23.173
CRR073320Tawny withering 32.661