Gene detail

Detail information of GWHGAAZE021601

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010030065.1	6.48414E-48	PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 [Eucalyptus grandis]
COG	YP_284821.1	4E-13	protein kinase:GAF
Swissprot	tr\|Q94F62\|BAK1_ARATH	2E-46	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 (Precursor)
trEMBL	tr\|A0A059AT53\|A0A059AT53_EUCGR	2E-48	Uncharacterized protein {ECO:0000313\|EMBL:KCW57023.1}
TAIR10	AT4G33430.1	2E-44	BRI1-associated receptor kinase

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000006	gene	57708205	57713125	-
GWHAAZE00000006	mRNA	57708205	57713125	-
GWHAAZE00000006	exon	57708205	57708613	-
GWHAAZE00000006	exon	57710786	57710935	-
GWHAAZE00000006	exon	57711064	57711120	-
GWHAAZE00000006	exon	57711524	57711673	-
GWHAAZE00000006	exon	57711802	57711858	-
GWHAAZE00000006	exon	57712262	57712411	-
GWHAAZE00000006	exon	57712540	57712596	-
GWHAAZE00000006	exon	57713082	57713125	-
GWHAAZE00000006	CDS	57713082	57713125	-
GWHAAZE00000006	CDS	57712540	57712596	-
GWHAAZE00000006	CDS	57712262	57712411	-
GWHAAZE00000006	CDS	57711802	57711858	-
GWHAAZE00000006	CDS	57711524	57711673	-
GWHAAZE00000006	CDS	57711064	57711120	-
GWHAAZE00000006	CDS	57710786	57710935	-
GWHAAZE00000006	CDS	57708205	57708613	-

Transcript Sequence
>GWHTAAZE021625 ATGGAGTTTATCATACAGAGCTCTATAAGTAGACCCGAAATGAGGTTCGGTAAGGTTTACAAAGGATGTTTGGCTGATGGTACCTTGGTGGCCGTAGAAAGAACGTATGCTCGTCTATGGTCTTCTAAGCTCGATAAGGTTTACAAAGGATGTTTAGATGATGGCGCCCTGGCGGCCATAGAAAGGCAGTGTACTCAAGGTGGGGAGATCCCTCAAGATGTGGTGATCCAGTTCCAAAAAGAAGTCAACATGTTCGGTAAGGTTTACAAAGGATGTTTGGCTGATGGTACCTTGGTGGCCGTAGAAAGAACGTGTGCTCGTCTATGGTCTTCTAAGCTCGATAAGGTTTACAAAGGATGTTTAGATGATGGTGCCCTGGTGGCCATAGAAAGGCAGTGTACTCAAGGTGGGGAGATCCCTCAAGATGTGGTGATCCAGTTCCAAAAAGAAGTCAACATGTTCGGTAAGGTTTACAAAGGATGTTTGGCTGATGGTACCTTGGTGGCCGTAGAAAGAACGTATGCTCGTCTATGGTCTTCTAAGCTCGATAAGGTTTACAAAGGATGTTTAGATGATGGCGCCCTGGCGGCCATAGAAAGGCAGTGTACTCAAGGTGGGGAGATCCCTCAAGATGTGGTGATCCAGTTCCAAAAGGAAGTCAACATAGCGACCAGAACTGCCATCCCGACTCAATTGGCCGAAAAGGAAGCAAATCGCATTGGGATCCGCAAGGGGTGTAATGTATTTGCAAGATCAATAGATCATTGCGTCCCTAAGATCATTCACAGAGACATTAAAGCTGCAAACATATTTTTGGATGAGGAGTTTAAAGCAGTTGTTGGAGACTTTGGGTTGGCTAAGTCGATGGACTACAAGGACACACTTGTTACCACGGCCGTGCATGGCACAATTGGACAAATAGCTCCTGAGTACCTTTACACCAGAAAAGCTTCCGAGAAAAGCGATGTTTTTGGGTATGGGGTTATGCTGCTTGAGCTCATAAGTGGACACAGGGCTTTCGATCTTATCGGCTTGCCAATGATGATGATGTTGTCATGTTGCTTGATTGGGTGA

Network for GWHGAAZE021601

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	258	341	5.40E-19

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_LRR-II

KEGG pathway

KO	Enzyme	pathway	mapID
K13416	BAK1	MAPK signaling pathway - plant	map04016
		Plant hormone signal transduction	map04075
		Plant-pathogen interaction	map04626

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	0.096
	SRR3591711	White flower	0.000
	SRR3591712	Green floral bud	0.010
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.000
	SRR8316896	Juvenile bud stage	0.000
	SRR8316897	Juvenile bud stage	0.000
	SRR8316894	Third green stage	0.000
	SRR8316900	Third green stage	0.000
	SRR8316901	Third green stage	0.000
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.000
	SRR8316903	Complete white stage	0.000
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	0.000
	SRR6706287	Light intensity 50%	0.000
	SRR6706288	Light intensity 20%	0.000
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.000
	CNS0095593	Slightly white alabastrum(diploid) 2	0.000
	CNS0095594	Slightly white alabastrum(diploid) 3	0.000
	CNS0095595	Whole white alabastrum(diploid) 2	0.000
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.000
	CNS0095598	Silvery flower (diploied) 1	0.000
	CNS0095599	Silvery flower (diploied) 2	0.000
	CNS0095600	Silvery flower (diploied) 3	0.000
	CNS0095601	Golden flower (diploid) 1	0.302
	CNS0095602	Golden flower (diploid) 2	0.000
	CNS0095603	Golden flower (diploid) 3	0.000
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.000
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.000
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.000
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.010
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.000
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	0.000
	CNS0095612	Silvery flower (tetraploid) 3	0.000
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.000
	CRR073298	Stem 2	0.000
	CRR073299	Stem 3	0.000
	CRR073300	Leaf 1	0.000
	CRR073301	Leaf 2	0.000
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000