Detail information of GWHGAAZE021597


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrEYU44215.18.70892E-92hypothetical protein MIMGU_mgv1a000477mg [Erythranthe guttata]
COGYP_006915967.14E-19PASTA sensor-containing serine/threonine protein kinase
Swissprottr|Q9FN92|Y5597_ARATH6E-83Probable receptor-like protein kinase At5g59700 (Precursor)
trEMBLtr|A0A022RZ14|A0A022RZ14_ERYGU3E-92Uncharacterized protein {ECO:0000313|EMBL:EYU44215.1}
TAIR10AT5G38990.14E-72Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene5765036857651072-
GWHAAZE00000006mRNA5765036857651072-
GWHAAZE00000006exon5765036857651072-
GWHAAZE00000006CDS5765036857651072-
Transcript Sequence

Network for GWHGAAZE021597

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0261Protein Kinases RLK-Pelle_CrRLK1L-1 family Protein Kinases RLK-Pelle_CrRLK1L-1
Protein Kinases RLK-Pelle_LRR-Xa family Protein Kinases RLK-Pelle_LRR-Xa
Protein Kinases RLK-Pelle_RLCK-IV family Protein Kinases RLK-Pelle_RLCK-IV
Transcription factor MADS-MIKC family Transcription factor MADS-MIKC
GO:0006783 heme biosynthetic process GOslim:biological_process
GO:0006468 protein phosphorylation GOslim:biological_process
GO:0005524 ATP binding GOslim:molecular_function
GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity GOslim:molecular_function
GO:0004325 ferrochelatase activity GOslim:molecular_function
GO:0004672 protein kinase activity GOslim:molecular_function
GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding GOslim:molecular_function
GO:0045944 positive regulation of transcription by RNA polymerase II GOslim:biological_process
GO:0042254 ribosome biogenesis GOslim:biological_process


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.18PK_Tyr_Ser-Thr12312.90E-38
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_CrRLK1L-1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf21.039
SRR3591706second leaf4.968
SRR3591707mature leaf5.895
SRR3591708Shoot apex7.727
SRR3591709Stem24.473
SRR3591710White floral bud3.764
SRR3591711White flower6.362
SRR3591712Green floral bud3.850
SRR3591713Yellow flower3.409
SRP173429 SRR8316895Juvenile bud stage 4.093
SRR8316896Juvenile bud stage 7.618
SRR8316897Juvenile bud stage 3.989
SRR8316894Third green stage 1.324
SRR8316900Third green stage 2.900
SRR8316901Third green stage 3.025
SRR8316898Complete white stage 1.639
SRR8316899Complete white stage 8.505
SRR8316903Complete white stage 1.896
SRR8316902Silver flowering stage1.586
SRR8316904Silver flowering stage1.069
SRR8316905Silver flowering stage0.275
SRR8316906Gold flowering stage 1.907
SRR8316907Gold flowering stage 2.483
SRR8316908Gold flowering stage 2.629
SRP132670SRR6706286Control4.891
SRR6706287Light intensity 50%5.456
SRR6706288Light intensity 20%5.989
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.285
CNS0095593Slightly white alabastrum(diploid) 24.676
CNS0095594Slightly white alabastrum(diploid) 34.676
CNS0095595Whole white alabastrum(diploid) 22.958
CNS0095596Whole white alabastrum(diploid) 30.848
CNS0095597Whole white alabastrum(diploid) 42.950
CNS0095598Silvery flower (diploied) 13.726
CNS0095599Silvery flower (diploied) 26.745
CNS0095600Silvery flower (diploied) 35.359
CNS0095601Golden flower (diploid) 15.592
CNS0095602Golden flower (diploid) 26.431
CNS0095603Golden flower (diploid) 36.603
CNS0095604Slightly white alabastrum(tetraploid) 13.316
CNS0095605Slightly white alabastrum(tetraploid) 21.684
CNS0095606Slightly white alabastrum(tetraploid) 36.167
CNS0095607Whole white alabastrum(tetraploid) 12.431
CNS0095608Whole white alabastrum(tetraploid) 20.494
CNS0095609Whole white alabastrum(tetraploid) 31.960
CNS0095610Silvery flower (tetraploid) 11.359
CNS0095611Silvery flower (tetraploid) 21.186
CNS0095612Silvery flower (tetraploid) 32.147
CNS0095613Golden flower (tetraploid) 10.810
CNS0095614Golden flower (tetraploid) 21.063
CNS0095615Golden flower (tetraploid) 30.171
CRA001975CRR073297Stem 15.546
CRR073298Stem 26.035
CRR073299Stem 34.146
CRR073300Leaf 17.469
CRR073301Leaf 24.797
CRR073302Leaf 36.232
CRR073303Juvenile bud 19.987
CRR073304Juvenile bud 25.995
CRR073305Juvenile bud 35.947
CRR073306Third green 12.269
CRR073307Third green 24.602
CRR073308Third green 32.110
CRR073309Second white 12.011
CRR073310Second white 20.514
CRR073311Second white 30.250
CRR073312Silver flowering 11.215
CRR073313Silver flowering 21.015
CRR073314Silver flowering 31.029
CRR073315Gold flowering 18.337
CRR073316Gold flowering 214.035
CRR073317Gold flowering 35.350
CRR073318Tawny withering 110.768
CRR073319Tawny withering 221.825
CRR073320Tawny withering 310.092