Gene detail

Detail information of GWHGAAZE021584

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU44215.1	3.26651E-39	hypothetical protein MIMGU_mgv1a000477mg [Erythranthe guttata]
Swissprot	tr\|Q3E8W4\|ANX2_ARATH	1E-34	Receptor-like protein kinase ANXUR2 (Precursor)
trEMBL	tr\|A0A022RZ14\|A0A022RZ14_ERYGU	1E-39	Uncharacterized protein {ECO:0000313\|EMBL:EYU44215.1}
TAIR10	AT5G28680.1	4E-32	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000006	gene	57345277	57347412	+
GWHAAZE00000006	mRNA	57345277	57347412	+
GWHAAZE00000006	exon	57345277	57345336	+
GWHAAZE00000006	exon	57345725	57346333	+
GWHAAZE00000006	exon	57346397	57346690	+
GWHAAZE00000006	exon	57347359	57347412	+
GWHAAZE00000006	CDS	57345277	57345336	+
GWHAAZE00000006	CDS	57345725	57346333	+
GWHAAZE00000006	CDS	57346397	57346690	+
GWHAAZE00000006	CDS	57347359	57347412	+

Transcript Sequence
>GWHTAAZE021608 ATGCATCAATTATCGGTGGATTTGGAAAGGTCTACAAAGGTGTCATCGACCATGGGGCAAGCTCAACAAATCGGGATTGACCGATGTCGCACCAAGGTTAAGGGCACGTTTGGGTATCTCGATCCCGAGTATCTCTTGACCCTTAGATTGACGAGGAAATCAGATGTGTACTCGTTTGGGGTTGTATTGATGGAAGTATTGTGTGGGAGGCCAGCACTTGATCCAAGACTCCAGTGGGAGCAAAGAAGTCTAGCGAGATGGGCCCAACAATGTATCAAAGAAGAAAGAGTAAGTCAGATTATTGATCCCAATTTGAAGTGGGAAATCTTTCCGAATTCATTGACGAAGTTTGTGGAACTTGCCGACCAGTGTTTACATAATTATCCAAAGAAACGCCCAACAATGTCTGGGGTCGTGACAGATCTTGAGCAGGCATTAGCATTCCAAGTGAGACCCGATTCTTCTTCTATTATTGAGATGGAATTTTTTAAAGATGAGTGGGCTTATTATACTAAGGAAGAGAGTGAAAATGTTGGGCAAAATGATGCAACTACTAGTTTGGACGATGAGAGCAAGGAGCAGCCATATAACCAGTTGGAGGTGACTCATGGTGACAATGGTGGGCAAAATGATGCTATTAGTAGTCTACACAATGAAGGCAGACGGCAGGAGGTAGTACGCGGCGATAATGGTGGGAGAAATGATGCAAGTATTAGTCTAGACGACAAAAGCGAAGTGCAGGCGTATAGCCAGTTGGGAGTAACACAGTGTGATAATGGTGGGAATGAAGATGAGCCAACCAAGACCACACTGCAACGCCAAATTTTGGTGTTGGATTTGAACTTGACACCGTTCGAGAATGATTTATTGAAAATTAAGTATGACTTAGGTCTAACATGCAAAGCTCCATCTTTAGAGGCTAGTTCATCTTCAAAATTGTTTCAACATCAAGGTAACATCCAGGGTATTGCTGGTGCCGCAAATGGATGTGTGGATTTATGCTCACACACACAGTAG

Network for GWHGAAZE021584

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	19	139	1.00E-12

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.201
	SRR3591706	second leaf	0.080
	SRR3591707	mature leaf	0.040
	SRR3591708	Shoot apex	0.017
	SRR3591709	Stem	0.256
	SRR3591710	White floral bud	1.189
	SRR3591711	White flower	0.906
	SRR3591712	Green floral bud	0.799
	SRR3591713	Yellow flower	1.030
SRP173429	SRR8316895	Juvenile bud stage	0.000
	SRR8316896	Juvenile bud stage	0.000
	SRR8316897	Juvenile bud stage	1.118
	SRR8316894	Third green stage	0.000
	SRR8316900	Third green stage	0.204
	SRR8316901	Third green stage	0.070
	SRR8316898	Complete white stage	0.148
	SRR8316899	Complete white stage	0.488
	SRR8316903	Complete white stage	0.170
	SRR8316902	Silver flowering stage	0.036
	SRR8316904	Silver flowering stage	0.086
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.303
SRP132670	SRR6706286	Control	0.129
	SRR6706287	Light intensity 50%	0.091
	SRR6706288	Light intensity 20%	0.117
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.087
	CNS0095593	Slightly white alabastrum(diploid) 2	0.185
	CNS0095594	Slightly white alabastrum(diploid) 3	0.127
	CNS0095595	Whole white alabastrum(diploid) 2	0.116
	CNS0095596	Whole white alabastrum(diploid) 3	0.417
	CNS0095597	Whole white alabastrum(diploid) 4	0.515
	CNS0095598	Silvery flower (diploied) 1	0.000
	CNS0095599	Silvery flower (diploied) 2	0.000
	CNS0095600	Silvery flower (diploied) 3	0.039
	CNS0095601	Golden flower (diploid) 1	0.000
	CNS0095602	Golden flower (diploid) 2	0.162
	CNS0095603	Golden flower (diploid) 3	0.003
	CNS0095604	Slightly white alabastrum(tetraploid) 1	1.051
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.732
	CNS0095606	Slightly white alabastrum(tetraploid) 3	3.051
	CNS0095607	Whole white alabastrum(tetraploid) 1	1.618
	CNS0095608	Whole white alabastrum(tetraploid) 2	1.915
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.883
	CNS0095610	Silvery flower (tetraploid) 1	1.356
	CNS0095611	Silvery flower (tetraploid) 2	1.173
	CNS0095612	Silvery flower (tetraploid) 3	1.860
	CNS0095613	Golden flower (tetraploid) 1	1.707
	CNS0095614	Golden flower (tetraploid) 2	1.704
	CNS0095615	Golden flower (tetraploid) 3	0.919
CRA001975	CRR073297	Stem 1	0.014
	CRR073298	Stem 2	0.063
	CRR073299	Stem 3	0.024
	CRR073300	Leaf 1	0.106
	CRR073301	Leaf 2	0.188
	CRR073302	Leaf 3	0.030
	CRR073303	Juvenile bud 1	0.174
	CRR073304	Juvenile bud 2	0.041
	CRR073305	Juvenile bud 3	0.080
	CRR073306	Third green 1	0.015
	CRR073307	Third green 2	0.002
	CRR073308	Third green 3	0.132
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.032
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.008
	CRR073315	Gold flowering 1	0.055
	CRR073316	Gold flowering 2	0.077
	CRR073317	Gold flowering 3	0.030
	CRR073318	Tawny withering 1	0.066
	CRR073319	Tawny withering 2	0.012
	CRR073320	Tawny withering 3	0.015