Gene detail

Detail information of GWHGAAZE021573

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011092409.1	0	PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like [Sesamum indicum]
COG	YP_001958461.1	4E-22	hypothetical protein Aasi_1443
Swissprot	tr\|Q94F62\|BAK1_ARATH	0	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 (Precursor)
trEMBL	tr\|A0A068TQ37\|A0A068TQ37_COFCA	0	Coffea canephora DH200=94 genomic scaffold, scaffold_1 {ECO:0000313\|EMBL:CDO97478.1}
TAIR10	AT4G33430.1	2E-165	BRI1-associated receptor kinase

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000006	gene	57154166	57160533	+
GWHAAZE00000006	mRNA	57154166	57160533	+
GWHAAZE00000006	exon	57154166	57155198	+
GWHAAZE00000006	exon	57156079	57156198	+
GWHAAZE00000006	exon	57157794	57158135	+
GWHAAZE00000006	exon	57159100	57159494	+
GWHAAZE00000006	exon	57160216	57160533	+
GWHAAZE00000006	CDS	57154166	57155198	+
GWHAAZE00000006	CDS	57156079	57156198	+
GWHAAZE00000006	CDS	57157794	57158135	+
GWHAAZE00000006	CDS	57159100	57159494	+
GWHAAZE00000006	CDS	57160216	57160533	+

Transcript Sequence
>GWHTAAZE021597 GTGGATTTGGTAACGTACAAAGGGAATATCATTGATAATAATGGTAATGGCGCATCATCATCATCTACTACTGTTGCTATAAAGCGTTTGAATCCCTTGTCTAAGCAAGGTGCCTCTGAGTTTTGGACTGAGATTACTATGCTTTCTAGGTTTCGACACAGCCACCTCGTTTCTTTGATTGGGTACTGTGATAATTGTAACGAAATGATCCTCGTTTACGAGTATATGGTCCATGGAACCCTAGCTGACCATGTGCACAACATTAATAGAAAAAATGATGAGGGTAATAATTCCTCTTTATCTTGGGTTCAACGCCTCAAAATATGCATAGGGGCTGCTCGTGGATTGGACTACCTGCATACTGGTACGGCCATCCTCCAAAGAGTCATACATCTAGATGTGAAAAGCTCAAACATTCTGTTGGATGAGAATTGGGCGGCTAAGATCTCCGATTTTGGATTGTCCAAAATTGGCCCTGCGGAGCAAGAGGTCACCGATGTTAGCACTCTGCACATCCAAGGCACATTAGGTTACATGGATCCCGATTATTTCTTGACTCACAGATTCACAAGGAAATCAGATGTGTATGCATTTGGGGTGGTATTGTTGGAAGTACTCTGCGAGAGGCCGGCTCTGGATCAAAGCCTTAATGAGGACCAATGGGGTCTTGCTGGATGGGGCCAAGAGTGCATCAACGAAGGAGCATCACATAAGATTATTGGGCCAAATTTGAAGTGGGAAATCTTGCCAAATTCTTTGATGGAATTTGTGCAAATTGCGGATCAATGCTTGCATAGTCGTCCAAAGCAACGTCCTACAATGTCTGAGGTGGTGGCGAAACTTGAGCTTGCATTGGCATTTCAACTGCGCACTGATCTTGTGATCGAGGAGTATTCGTTTAAAACTTGTTTGCCTATTAACAACCAAGAAAATCCTGTTTCTTATCGGGAGGACGACCATATTGATAAGGTTCTACAGCAAGGCAATGCAGACAGCAAACAGTTTTCCACAGTTGGAGCTCCGGTGGTCTTGGGTTTTGTTTTAGACTACAATGTCATGGGCCAACGCTCTACAATGAACCTAGCTAAAGAAGCCTATCCCGATAAAATGGTGGGATCCACATTGACTCCCGCCAATCTACTCTTAGCCATATCTGCAAAGGATCCAGAAGTTCATCGAGTACAACGCAAGTGGTTTCCACTGCGTGAACTACAAGTTGCAACAGATAACTTTAGCAATAGAAATATTTTGGGAAGAGGTGGATTCGGTAAGGTTTACAAAGGACGTTTGGATGATGGCACCCTGGTGGCCGTAAAAAGGCTAAAAGAGGAGCGTACTCCAGGTGGGCAGCTCCAGTTCCAAACAGAAGTCGAATTGTTAAGCAAAACTGTGCATCGTAATCTATGTCGCTTGATAGGCTTTTGTACAACTCCCACAGAACGTGTGCTCGTCTATCCTTATATGGCTAATGGAAGTGTTGCATCATCTTTAAGAGAGCGACCAGAAACGCAACCCCCACTTGATTGGCCGACAAGGAAGCAAATTGCACTGGGATCCGCAAGGGGTATAATGTATTTGCATGATCATTGTGACCCCAAGATCATTCACAGAGACATTAAAGCTGCAAACATACTTTTGGATGAGGAGTTTGAAGCAGTTGTTGGAGACTTTGGGTTGGCTAAGCTGATGGACTACAAGGACTCGCAAGTTACCACAGCCGTGCGTGGCACAATTGGACATATACCTCCTGAGTACCTTTCCACCGGAAAAACTTCCGAGAAAAGCGATGTTTTCGGGTATGGGGTTATGCTACTTGAGCTCATAACTGGACAGAGGGCTTTCGATCTTGCTCGGCTTGCCAATGATGATGATGTCATGTTGCTTGATTGGGTGAAAGGACTTATGAAGGAAAAGAAGTTAGAAGCATTGGTGGACGCAGATCTGAACGGTAACTACAATGACAACGAGGTGGAGCAGCTGATCCAGGTGGCTCGGCTCTGCACCCGACGCTCCCTGACTGACCGCCCCAAGATGTCAGAGGTTGTCAGAATGCTCGAAGGCGATGGTTTGTCCAAGAGGTGGGAAGAGATGCAAAACGATTTAGTTTTCCAACAAGAGTTCAACAACGCCCTTTACCCCAATGCTGATTGGATCATTGCCGACTCCACCTCCTACCTCCAGCCCGATGAATTATCTGGCCCCAGATAA

Network for GWHGAAZE021573

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07714.18	PK_Tyr_Ser-Thr	17	281	2.70E-40
PF07714.18	PK_Tyr_Ser-Thr	414	685	3.30E-45

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_LRR-II

KEGG pathway

KO	Enzyme	pathway	mapID
K13416	BAK1	MAPK signaling pathway - plant	map04016
		Plant hormone signal transduction	map04075
		Plant-pathogen interaction	map04626

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding
GO:0004674	molecular_function	protein serine/threonine kinase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	47.073
	SRR3591706	second leaf	3.267
	SRR3591707	mature leaf	2.923
	SRR3591708	Shoot apex	14.114
	SRR3591709	Stem	32.251
	SRR3591710	White floral bud	4.392
	SRR3591711	White flower	5.308
	SRR3591712	Green floral bud	5.772
	SRR3591713	Yellow flower	4.687
SRP173429	SRR8316895	Juvenile bud stage	30.944
	SRR8316896	Juvenile bud stage	30.148
	SRR8316897	Juvenile bud stage	48.418
	SRR8316894	Third green stage	2.950
	SRR8316900	Third green stage	8.693
	SRR8316901	Third green stage	16.433
	SRR8316898	Complete white stage	1.140
	SRR8316899	Complete white stage	14.190
	SRR8316903	Complete white stage	1.272
	SRR8316902	Silver flowering stage	1.423
	SRR8316904	Silver flowering stage	1.929
	SRR8316905	Silver flowering stage	0.942
	SRR8316906	Gold flowering stage	2.777
	SRR8316907	Gold flowering stage	2.695
	SRR8316908	Gold flowering stage	2.461
SRP132670	SRR6706286	Control	4.342
	SRR6706287	Light intensity 50%	4.882
	SRR6706288	Light intensity 20%	4.295
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	15.333
	CNS0095593	Slightly white alabastrum(diploid) 2	21.801
	CNS0095594	Slightly white alabastrum(diploid) 3	20.409
	CNS0095595	Whole white alabastrum(diploid) 2	19.495
	CNS0095596	Whole white alabastrum(diploid) 3	8.090
	CNS0095597	Whole white alabastrum(diploid) 4	13.417
	CNS0095598	Silvery flower (diploied) 1	19.427
	CNS0095599	Silvery flower (diploied) 2	34.144
	CNS0095600	Silvery flower (diploied) 3	17.347
	CNS0095601	Golden flower (diploid) 1	39.099
	CNS0095602	Golden flower (diploid) 2	32.082
	CNS0095603	Golden flower (diploid) 3	31.716
	CNS0095604	Slightly white alabastrum(tetraploid) 1	3.426
	CNS0095605	Slightly white alabastrum(tetraploid) 2	3.137
	CNS0095606	Slightly white alabastrum(tetraploid) 3	4.865
	CNS0095607	Whole white alabastrum(tetraploid) 1	2.521
	CNS0095608	Whole white alabastrum(tetraploid) 2	2.195
	CNS0095609	Whole white alabastrum(tetraploid) 3	4.992
	CNS0095610	Silvery flower (tetraploid) 1	4.172
	CNS0095611	Silvery flower (tetraploid) 2	5.285
	CNS0095612	Silvery flower (tetraploid) 3	6.405
	CNS0095613	Golden flower (tetraploid) 1	2.382
	CNS0095614	Golden flower (tetraploid) 2	3.812
	CNS0095615	Golden flower (tetraploid) 3	2.150
CRA001975	CRR073297	Stem 1	12.758
	CRR073298	Stem 2	11.183
	CRR073299	Stem 3	6.277
	CRR073300	Leaf 1	16.163
	CRR073301	Leaf 2	20.578
	CRR073302	Leaf 3	6.880
	CRR073303	Juvenile bud 1	6.615
	CRR073304	Juvenile bud 2	5.327
	CRR073305	Juvenile bud 3	9.183
	CRR073306	Third green 1	2.982
	CRR073307	Third green 2	2.888
	CRR073308	Third green 3	2.558
	CRR073309	Second white 1	1.225
	CRR073310	Second white 2	3.185
	CRR073311	Second white 3	2.329
	CRR073312	Silver flowering 1	6.548
	CRR073313	Silver flowering 2	4.380
	CRR073314	Silver flowering 3	5.201
	CRR073315	Gold flowering 1	4.676
	CRR073316	Gold flowering 2	11.469
	CRR073317	Gold flowering 3	5.486
	CRR073318	Tawny withering 1	16.124
	CRR073319	Tawny withering 2	22.976
	CRR073320	Tawny withering 3	22.045