Detail information of GWHGAAZE021086


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011084145.10PREDICTED: probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [Sesamum indicum]
COGYP_001661056.11E-122hypothetical protein MAE_60420
Swissprottr|Q9M8Y0|SEC_ARATH0Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC
trEMBLtr|M1BAC1|M1BAC1_SOLTU0Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400040741}
TAIR10AT3G04240.10Tetratricopeptide repeat (TPR)-like superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene3473211134760358-
GWHAAZE00000006mRNA3473211134760358-
GWHAAZE00000006exon3476028434760358-
GWHAAZE00000006exon3475999834760204-
GWHAAZE00000006exon3474485134744965-
GWHAAZE00000006exon3474315334743298-
GWHAAZE00000006exon3474290434743002-
GWHAAZE00000006exon3474276334742813-
GWHAAZE00000006exon3474177434741890-
GWHAAZE00000006exon3474162134741677-
GWHAAZE00000006exon3474059034740709-
GWHAAZE00000006exon3473981834739880-
GWHAAZE00000006exon3473965234739730-
GWHAAZE00000006exon3473898534739094-
GWHAAZE00000006exon3473882934738882-
GWHAAZE00000006exon3473867334738740-
GWHAAZE00000006exon3473846234738564-
GWHAAZE00000006exon3473816334738365-
GWHAAZE00000006exon3473796634738062-
GWHAAZE00000006exon3473489534734966-
GWHAAZE00000006exon3473471134734787-
GWHAAZE00000006exon3473451334734629-
GWHAAZE00000006exon3473432134734405-
GWHAAZE00000006exon3473406134734228-
GWHAAZE00000006exon3473338334733493-
GWHAAZE00000006exon3473320234733288-
GWHAAZE00000006exon3473283834732965-
GWHAAZE00000006exon3473266534732747-
GWHAAZE00000006exon3473230334732408-
GWHAAZE00000006exon3473211134732198-
GWHAAZE00000006CDS3476028434760358-
GWHAAZE00000006CDS3475999834760204-
GWHAAZE00000006CDS3474485134744965-
GWHAAZE00000006CDS3474315334743298-
GWHAAZE00000006CDS3474290434743002-
GWHAAZE00000006CDS3474276334742813-
GWHAAZE00000006CDS3474177434741890-
GWHAAZE00000006CDS3474162134741677-
GWHAAZE00000006CDS3474059034740709-
GWHAAZE00000006CDS3473981834739880-
GWHAAZE00000006CDS3473965234739730-
GWHAAZE00000006CDS3473898534739094-
GWHAAZE00000006CDS3473882934738882-
GWHAAZE00000006CDS3473867334738740-
GWHAAZE00000006CDS3473846234738564-
GWHAAZE00000006CDS3473816334738365-
GWHAAZE00000006CDS3473796634738062-
GWHAAZE00000006CDS3473489534734966-
GWHAAZE00000006CDS3473471134734787-
GWHAAZE00000006CDS3473451334734629-
GWHAAZE00000006CDS3473432134734405-
GWHAAZE00000006CDS3473406134734228-
GWHAAZE00000006CDS3473338334733493-
GWHAAZE00000006CDS3473320234733288-
GWHAAZE00000006CDS3473283834732965-
GWHAAZE00000006CDS3473266534732747-
GWHAAZE00000006CDS3473230334732408-
GWHAAZE00000006CDS3473211134732198-
Transcript Sequence

Network for GWHGAAZE021086

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13181.7TPR_82032350.18
PF00515.29TPR_12372692.10E-09
PF13181.7TPR_83073370.00012
PF13424.7TPR_123404017.90E-10
PF00515.29TPR_14084403.80E-09
PF00515.29TPR_14785061.70E-07
PF13414.7TPR_115165572.50E-09
PF13844.7Glyco_transf_415908283.90E-82
PF13844.7Glyco_transf_418409574.30E-54
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09667OGT Other types of O-glycan biosynthesis map00514

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf140.151
SRR3591706second leaf73.327
SRR3591707mature leaf88.554
SRR3591708Shoot apex89.456
SRR3591709Stem144.186
SRR3591710White floral bud175.372
SRR3591711White flower180.667
SRR3591712Green floral bud126.858
SRR3591713Yellow flower161.315
SRP173429 SRR8316895Juvenile bud stage 69.809
SRR8316896Juvenile bud stage 92.248
SRR8316897Juvenile bud stage 43.331
SRR8316894Third green stage 44.638
SRR8316900Third green stage 114.770
SRR8316901Third green stage 107.702
SRR8316898Complete white stage 88.197
SRR8316899Complete white stage 207.018
SRR8316903Complete white stage 123.969
SRR8316902Silver flowering stage73.530
SRR8316904Silver flowering stage122.755
SRR8316905Silver flowering stage49.182
SRR8316906Gold flowering stage 148.448
SRR8316907Gold flowering stage 151.455
SRR8316908Gold flowering stage 157.356
SRP132670SRR6706286Control152.107
SRR6706287Light intensity 50%157.960
SRR6706288Light intensity 20%166.723
CNP0000432CNS0095592Slightly white alabastrum(diploid) 139.470
CNS0095593Slightly white alabastrum(diploid) 238.510
CNS0095594Slightly white alabastrum(diploid) 333.831
CNS0095595Whole white alabastrum(diploid) 242.202
CNS0095596Whole white alabastrum(diploid) 341.502
CNS0095597Whole white alabastrum(diploid) 441.523
CNS0095598Silvery flower (diploied) 171.700
CNS0095599Silvery flower (diploied) 261.281
CNS0095600Silvery flower (diploied) 3199.302
CNS0095601Golden flower (diploid) 163.051
CNS0095602Golden flower (diploid) 2193.669
CNS0095603Golden flower (diploid) 3182.506
CNS0095604Slightly white alabastrum(tetraploid) 150.865
CNS0095605Slightly white alabastrum(tetraploid) 236.079
CNS0095606Slightly white alabastrum(tetraploid) 3115.649
CNS0095607Whole white alabastrum(tetraploid) 139.212
CNS0095608Whole white alabastrum(tetraploid) 238.820
CNS0095609Whole white alabastrum(tetraploid) 396.746
CNS0095610Silvery flower (tetraploid) 1164.667
CNS0095611Silvery flower (tetraploid) 2153.498
CNS0095612Silvery flower (tetraploid) 3140.191
CNS0095613Golden flower (tetraploid) 170.357
CNS0095614Golden flower (tetraploid) 2129.119
CNS0095615Golden flower (tetraploid) 3201.222
CRA001975CRR073297Stem 1110.904
CRR073298Stem 298.269
CRR073299Stem 3101.449
CRR073300Leaf 1128.504
CRR073301Leaf 2105.739
CRR073302Leaf 3116.614
CRR073303Juvenile bud 1119.292
CRR073304Juvenile bud 2111.622
CRR073305Juvenile bud 3173.038
CRR073306Third green 1108.256
CRR073307Third green 280.609
CRR073308Third green 3114.572
CRR073309Second white 186.119
CRR073310Second white 299.357
CRR073311Second white 3107.831
CRR073312Silver flowering 1102.616
CRR073313Silver flowering 2108.667
CRR073314Silver flowering 3108.875
CRR073315Gold flowering 152.361
CRR073316Gold flowering 286.179
CRR073317Gold flowering 366.541
CRR073318Tawny withering 1111.070
CRR073319Tawny withering 282.384
CRR073320Tawny withering 393.674