Gene detail

Detail information of GWHGAAZE021046

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	CDP02334.1	3.2474E-118	unnamed protein product [Coffea canephora]
COG	YP_008151634.1	2E-26	hypothetical protein SCE1572_26190
Swissprot	tr\|Q9SCZ4\|FERON_ARATH	1E-109	Receptor-like protein kinase FERONIA (Precursor)
trEMBL	tr\|A0A068U2D1\|A0A068U2D1_COFCA	1E-118	Coffea canephora DH200=94 genomic scaffold, scaffold_8 {ECO:0000313\|EMBL:CDP02334.1}
TAIR10	AT3G51550.1	5E-91	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000006	gene	33129997	33136717	+
GWHAAZE00000006	mRNA	33129997	33136717	+
GWHAAZE00000006	exon	33129997	33131300	+
GWHAAZE00000006	exon	33131634	33131981	+
GWHAAZE00000006	exon	33132460	33132596	+
GWHAAZE00000006	exon	33132683	33132792	+
GWHAAZE00000006	exon	33132899	33132941	+
GWHAAZE00000006	exon	33133027	33133118	+
GWHAAZE00000006	exon	33133646	33133694	+
GWHAAZE00000006	exon	33134154	33134228	+
GWHAAZE00000006	exon	33134696	33134835	+
GWHAAZE00000006	exon	33135245	33135324	+
GWHAAZE00000006	exon	33136443	33136522	+
GWHAAZE00000006	exon	33136611	33136717	+
GWHAAZE00000006	CDS	33129997	33131300	+
GWHAAZE00000006	CDS	33131634	33131981	+
GWHAAZE00000006	CDS	33132460	33132596	+
GWHAAZE00000006	CDS	33132683	33132792	+
GWHAAZE00000006	CDS	33132899	33132941	+
GWHAAZE00000006	CDS	33133027	33133118	+
GWHAAZE00000006	CDS	33133646	33133694	+
GWHAAZE00000006	CDS	33134154	33134228	+
GWHAAZE00000006	CDS	33134696	33134835	+
GWHAAZE00000006	CDS	33135245	33135324	+
GWHAAZE00000006	CDS	33136443	33136522	+
GWHAAZE00000006	CDS	33136611	33136717	+

Transcript Sequence
>GWHTAAZE021070 ATGATGTTGCTTTATCTAGGATTTTCCTTAACTTTTGTTACTTTCCCTCTCTTAATTCCCTCTCATAGTACAGATTTTGTTCATACAATCCTCCCTTCGGTGGTTTTGTTAATCCTAACCACTCTTTGCTTCATCATTCCTCCTAACTTAAGTTTTCTTCGACGTTCGATTTCTGGCAAGAAATTCACCGCCCCGGCCGATCAACTTTGCCGTCGGTTTACAATTGCCGAGATCAGAGCAGCCACTCGCAATTTTTCCCATGCGTTTGTCATCGGAAAAGGCGGATTTGGTAAGGTTTTCAAAGGTATCATCGACAATGGAGCTACTACGGTTGCCATAAAGCGATTGGATCCCATGTCCAAACAAGGGGTTAAGGAATTTTCAACTGAGATAGAAATGCTTTCAAAAATTCGGCACAGTCATGTTGTTTCTCTTATTGGTTATTGTGATAACAATGACGAAATGATCCTTGTTTATGAGTACGTGGAAAATGGAAGCTTGGCTGATCATCTCTACAAAGAGAAAGTGAGAAATGGTAGCAATTCTAATATGTCGTGGGTAAAACGTGTTAAGATATGTATAGGGGCAGCGCGAGGATTAGATTATCTTCACACTGGCACAGGTATATTGCATAGGGTTATACACCGTGATGTGAAGACTTCAAATATCTTATTGGATGAAAATTGGGCAGCTAAGATATCTGACTTTGGATTGTCCAAAACAGGCCCGGCAAATCAGTCATTGACCCATGTTAGTACCCGTGTTAAAGGAACTCCAGGTTATTGCGATCCGGAGTATTTCTTGACTCGCCGTTTAACTAGAAAATCAGATGTTTATTCTTTTGGAGTAGTGTTGTTCGAAGTATTGTGTGGAAGGCCGGCGTTTGATTATAAACTGCCTAAGGAGCAAATAAGCCTAGTGCTATGGGCCCAAGACTGCATCCAAGAAGAAAAAACTCACTTGCTTACGGATCCCAATTTGAAGTGGGAAATTTTTGATAATTCTTTGAAGGCTTTTGTGAATATTGCTGGTCAGTGCTTGCATAGTCGTTCGAAAAAACGACCTACAATGAGTGAGGTTGTTGCCTCGCTTGAGGTTGCATTGGCATTACAGGAGAAGAAGGATTCTTCTTTACTTGATGAAGATATTTTTGATTTTTGTGAGACTTATGACGACAGAGAGGTGGTGGGCTCTTGTAGTTTACACTCGGATAATGTATATACAGATTCTTCAACCACTCTCGTGCCATTATCCCACTATCCAACCGCAGGGCCTTGTGAAGCAATTGGAAAACCCTCTTTGAGGGAGGATACACTCGGAAGCTCTGCTTCTGAAAGCTTGTCCAAATTAAAGGAGAACATGACATGTGAAGAGCAGATCAATGACAACATTTTGGTGAGTGAGGTTGCGTCCTCGCTTCAGGTTGCACCAGCATTACAGGAGAAGAAGGATTCTTCTGTACTTGATGAGGAGGTTTATTATTTTGGTGAGTCTTTTGACAACCGAGAGGCAGAGGGCTCTTCTACAGTATTGTCGGATATTGCATATATGGATTCTTCAAGTTCAACCGTTCTCAAGCCATTACCTCCCAACTCGCCTATAGGGCAAAATGAAGGGATTGAAAAAACCTCCGTGGCAGAAGATACCTCGAGGGAGGATACACTTGGAGGTCCTGCTTCTGAAACTTTGTCCAATATAACGGCGAACATGATATATGACGAGCAGATCAATGAAAACATTCTTCACGCTCCCACAGTCACTGATCGGACTGCTTCTTTTGCTTTAGAAGAAAAGGGCCCTGGCATAGAAGGTGTTCGAATCAATGGGGATGCAAAACTAGGAGGGGAACTTATAGCTTGTCCATATCCTATATGCGAAACTTCTCTGTGTAATTTTCAGTGGCTCCGTTATCTTCGGGACAACACAAAATGGTACATTGAGGGAGCAACAAATCCAGAATATATAGTAACAGCTGATGATGTTGATACAATTATTGCCATTGAGTGCGTAGCTATGGATCACAAAGAGCATCTGGGAAAACCATTCAGAGTTATGGCAAATAATGGGAAGAGAATCACATGTGAACCAGATATGCAGCAGGAAATTGACAGATACATTTCTGAAGGACTAGCCACATTCGATGTTCTGTTCTTGGTAGATTCTCATGGTGGTGTTGTGCCAACAACTCTCGTTTCGGAAAAGTCACGCTACCCTTTTATGATCTATACGCAACAAGCTTTTCAAACTTTTAGATCACCAGCTACTGAAATTTCGAAGATATTTTGTGATGTTACTTCGATCAAAATTCCTCTTGGGCGCTCTGCAGATTTTGTATTAATATGTTCCAATGGTTCTTCACATTCTTTTAAGACAGGCGGGAAGGATACACTTCGAGCTCCTACTTCTTTACTTGGTTCTACTCCATCAGCGCATATGCAGTCAATGAATAGCGACATACTGGAACCAAGAAAAGAGGTGCATGTGTTTAGCAGCACCCTTTTCTTCTATGATATTGTCCTCTTCATTCTCACACAGGGAGGATACGCCTGGAGCTTCTGCTACTGA

Network for GWHGAAZE021046

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	90	362	2.40E-51

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004674	molecular_function	protein serine/threonine kinase activity
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	0.060
	SRR3591711	White flower	0.000
	SRR3591712	Green floral bud	0.000
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.099
	SRR8316896	Juvenile bud stage	0.404
	SRR8316897	Juvenile bud stage	0.115
	SRR8316894	Third green stage	0.148
	SRR8316900	Third green stage	0.424
	SRR8316901	Third green stage	0.555
	SRR8316898	Complete white stage	0.101
	SRR8316899	Complete white stage	0.168
	SRR8316903	Complete white stage	0.139
	SRR8316902	Silver flowering stage	0.187
	SRR8316904	Silver flowering stage	0.416
	SRR8316905	Silver flowering stage	0.255
	SRR8316906	Gold flowering stage	1.415
	SRR8316907	Gold flowering stage	1.177
	SRR8316908	Gold flowering stage	0.479
SRP132670	SRR6706286	Control	0.610
	SRR6706287	Light intensity 50%	0.531
	SRR6706288	Light intensity 20%	0.409
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.220
	CNS0095593	Slightly white alabastrum(diploid) 2	0.153
	CNS0095594	Slightly white alabastrum(diploid) 3	0.297
	CNS0095595	Whole white alabastrum(diploid) 2	0.359
	CNS0095596	Whole white alabastrum(diploid) 3	0.113
	CNS0095597	Whole white alabastrum(diploid) 4	0.440
	CNS0095598	Silvery flower (diploied) 1	0.355
	CNS0095599	Silvery flower (diploied) 2	0.160
	CNS0095600	Silvery flower (diploied) 3	0.048
	CNS0095601	Golden flower (diploid) 1	0.102
	CNS0095602	Golden flower (diploid) 2	0.003
	CNS0095603	Golden flower (diploid) 3	0.075
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.017
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.026
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.024
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.007
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.244
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.000
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	0.000
	CNS0095612	Silvery flower (tetraploid) 3	0.013
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.107
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.369
	CRR073298	Stem 2	0.222
	CRR073299	Stem 3	0.000
	CRR073300	Leaf 1	0.167
	CRR073301	Leaf 2	0.257
	CRR073302	Leaf 3	0.110
	CRR073303	Juvenile bud 1	0.358
	CRR073304	Juvenile bud 2	0.289
	CRR073305	Juvenile bud 3	0.214
	CRR073306	Third green 1	0.077
	CRR073307	Third green 2	0.022
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.184
	CRR073310	Second white 2	0.363
	CRR073311	Second white 3	0.157
	CRR073312	Silver flowering 1	0.343
	CRR073313	Silver flowering 2	0.083
	CRR073314	Silver flowering 3	0.496
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.013
	CRR073319	Tawny withering 2	0.052
	CRR073320	Tawny withering 3	0.030