Detail information of GWHGAAZE020953


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIR10AT3G10500.10.00007NAC domain containing protein 53

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene2827681728277311-
GWHAAZE00000006mRNA2827681728277311-
GWHAAZE00000006exon2827705928277311-
GWHAAZE00000006exon2827681728277025-
GWHAAZE00000006CDS2827705928277311-
GWHAAZE00000006CDS2827681728277025-
Transcript Sequence

Network for GWHGAAZE020953

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02365.16NAM101352.70E-10
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyNAC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355biological_processregulation of transcription, DNA-templated
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf74.625
SRR3591706second leaf43.627
SRR3591707mature leaf40.920
SRR3591708Shoot apex74.136
SRR3591709Stem72.459
SRR3591710White floral bud104.769
SRR3591711White flower125.046
SRR3591712Green floral bud119.265
SRR3591713Yellow flower114.361
SRP173429 SRR8316895Juvenile bud stage 21.262
SRR8316896Juvenile bud stage 31.665
SRR8316897Juvenile bud stage 37.578
SRR8316894Third green stage 14.484
SRR8316900Third green stage 57.269
SRR8316901Third green stage 47.756
SRR8316898Complete white stage 23.676
SRR8316899Complete white stage 68.340
SRR8316903Complete white stage 27.012
SRR8316902Silver flowering stage21.456
SRR8316904Silver flowering stage25.833
SRR8316905Silver flowering stage12.142
SRR8316906Gold flowering stage 35.417
SRR8316907Gold flowering stage 42.680
SRR8316908Gold flowering stage 68.550
SRP132670SRR6706286Control59.211
SRR6706287Light intensity 50%57.617
SRR6706288Light intensity 20%61.427
CNP0000432CNS0095592Slightly white alabastrum(diploid) 133.436
CNS0095593Slightly white alabastrum(diploid) 238.430
CNS0095594Slightly white alabastrum(diploid) 334.559
CNS0095595Whole white alabastrum(diploid) 236.337
CNS0095596Whole white alabastrum(diploid) 334.744
CNS0095597Whole white alabastrum(diploid) 436.533
CNS0095598Silvery flower (diploied) 130.638
CNS0095599Silvery flower (diploied) 222.804
CNS0095600Silvery flower (diploied) 347.341
CNS0095601Golden flower (diploid) 127.060
CNS0095602Golden flower (diploid) 240.970
CNS0095603Golden flower (diploid) 335.592
CNS0095604Slightly white alabastrum(tetraploid) 184.515
CNS0095605Slightly white alabastrum(tetraploid) 286.385
CNS0095606Slightly white alabastrum(tetraploid) 3104.918
CNS0095607Whole white alabastrum(tetraploid) 171.192
CNS0095608Whole white alabastrum(tetraploid) 266.228
CNS0095609Whole white alabastrum(tetraploid) 397.724
CNS0095610Silvery flower (tetraploid) 1123.436
CNS0095611Silvery flower (tetraploid) 2113.203
CNS0095612Silvery flower (tetraploid) 3105.517
CNS0095613Golden flower (tetraploid) 191.075
CNS0095614Golden flower (tetraploid) 2102.892
CNS0095615Golden flower (tetraploid) 384.471
CRA001975CRR073297Stem 123.817
CRR073298Stem 224.233
CRR073299Stem 324.561
CRR073300Leaf 143.645
CRR073301Leaf 228.719
CRR073302Leaf 335.079
CRR073303Juvenile bud 140.646
CRR073304Juvenile bud 232.888
CRR073305Juvenile bud 327.425
CRR073306Third green 116.158
CRR073307Third green 217.241
CRR073308Third green 316.898
CRR073309Second white 117.045
CRR073310Second white 216.924
CRR073311Second white 316.076
CRR073312Silver flowering 120.005
CRR073313Silver flowering 212.884
CRR073314Silver flowering 310.635
CRR073315Gold flowering 118.247
CRR073316Gold flowering 229.541
CRR073317Gold flowering 315.225
CRR073318Tawny withering 119.560
CRR073319Tawny withering 213.219
CRR073320Tawny withering 327.614