Detail information of GWHGAAZE020898


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCAH05023.12.33291E-48putative MAP kinase [Papaver rhoeas]
Swissprottr|Q06060|MPK_PEA2E-48Mitogen-activated protein kinase homolog D5
trEMBLtr|Q683Y6|Q683Y6_9MAGN9E-49Mitogen-activated protein kinase {ECO:0000256|RuleBase:RU361165}
TAIR10AT2G43790.12E-37MAP kinase 6

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene2551462525517841+
GWHAAZE00000006mRNA2551462525517841+
GWHAAZE00000006exon2551462525514630+
GWHAAZE00000006exon2551479925514889+
GWHAAZE00000006exon2551767225517841+
GWHAAZE00000006CDS2551462525514630+
GWHAAZE00000006CDS2551479925514889+
GWHAAZE00000006CDS2551767225517841+
Transcript Sequence

Network for GWHGAAZE020898

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14512MPK6 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075
Plant-pathogen interactionmap04626

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf42.219
SRR3591706second leaf21.302
SRR3591707mature leaf18.068
SRR3591708Shoot apex17.780
SRR3591709Stem42.742
SRR3591710White floral bud28.763
SRR3591711White flower29.530
SRR3591712Green floral bud37.363
SRR3591713Yellow flower27.847
SRP173429 SRR8316895Juvenile bud stage 10.072
SRR8316896Juvenile bud stage 15.740
SRR8316897Juvenile bud stage 6.580
SRR8316894Third green stage 3.242
SRR8316900Third green stage 11.272
SRR8316901Third green stage 19.674
SRR8316898Complete white stage 3.667
SRR8316899Complete white stage 22.313
SRR8316903Complete white stage 13.118
SRR8316902Silver flowering stage9.765
SRR8316904Silver flowering stage11.635
SRR8316905Silver flowering stage2.890
SRR8316906Gold flowering stage 5.181
SRR8316907Gold flowering stage 16.767
SRR8316908Gold flowering stage 12.297
SRP132670SRR6706286Control1.172
SRR6706287Light intensity 50%0.927
SRR6706288Light intensity 20%3.853
CNP0000432CNS0095592Slightly white alabastrum(diploid) 120.631
CNS0095593Slightly white alabastrum(diploid) 220.004
CNS0095594Slightly white alabastrum(diploid) 320.702
CNS0095595Whole white alabastrum(diploid) 217.918
CNS0095596Whole white alabastrum(diploid) 321.165
CNS0095597Whole white alabastrum(diploid) 418.789
CNS0095598Silvery flower (diploied) 113.524
CNS0095599Silvery flower (diploied) 216.252
CNS0095600Silvery flower (diploied) 319.670
CNS0095601Golden flower (diploid) 113.351
CNS0095602Golden flower (diploid) 218.982
CNS0095603Golden flower (diploid) 318.401
CNS0095604Slightly white alabastrum(tetraploid) 118.072
CNS0095605Slightly white alabastrum(tetraploid) 221.675
CNS0095606Slightly white alabastrum(tetraploid) 323.416
CNS0095607Whole white alabastrum(tetraploid) 118.941
CNS0095608Whole white alabastrum(tetraploid) 219.257
CNS0095609Whole white alabastrum(tetraploid) 322.113
CNS0095610Silvery flower (tetraploid) 119.649
CNS0095611Silvery flower (tetraploid) 220.416
CNS0095612Silvery flower (tetraploid) 324.437
CNS0095613Golden flower (tetraploid) 119.659
CNS0095614Golden flower (tetraploid) 217.798
CNS0095615Golden flower (tetraploid) 325.556
CRA001975CRR073297Stem 114.864
CRR073298Stem 219.938
CRR073299Stem 311.120
CRR073300Leaf 129.018
CRR073301Leaf 230.006
CRR073302Leaf 328.274
CRR073303Juvenile bud 136.954
CRR073304Juvenile bud 227.600
CRR073305Juvenile bud 335.353
CRR073306Third green 129.254
CRR073307Third green 231.824
CRR073308Third green 326.280
CRR073309Second white 126.065
CRR073310Second white 223.853
CRR073311Second white 35.052
CRR073312Silver flowering 125.794
CRR073313Silver flowering 215.751
CRR073314Silver flowering 36.644
CRR073315Gold flowering 13.468
CRR073316Gold flowering 217.479
CRR073317Gold flowering 34.638
CRR073318Tawny withering 125.288
CRR073319Tawny withering 224.545
CRR073320Tawny withering 316.549