Gene detail

Detail information of GWHGAAZE020600

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	AHF22089.1	2.9172E-144	CYP79D33 [Maesa lanceolata]
COG	YP_003950164.1	7E-24	cytochrome p450
Swissprot	tr\|Q9M7B8\|C79D1_MANES	3E-135	Valine N-monooxygenase 1
trEMBL	tr\|A0A061FZ73\|A0A061FZ73_THECC	2E-143	Cytochrome p450 79a2 {ECO:0000313\|EMBL:EOY20104.1}
TAIR10	AT5G05260.1	7E-100	cytochrome p450 79a2

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000006	gene	12153365	12154412	+
GWHAAZE00000006	mRNA	12153365	12154412	+
GWHAAZE00000006	exon	12153365	12153709	+
GWHAAZE00000006	exon	12153798	12154412	+
GWHAAZE00000006	CDS	12153365	12153709	+
GWHAAZE00000006	CDS	12153798	12154412	+

Transcript Sequence
>GWHTAAZE020624 ATGCAATTCTTTGGAGCTGGGATGCAAGATGAAGGACCAAGAGCTGAAGAAGAAGAGCATATCAACGCGGTCTTCTCAATTCTCAAGTACACATTTTCTTTTTGTGTTTTTGATTATGTTGGATTTTTACGTGGACGGTTTGATTTAGATGGTCAAGAAAAAAACATAAAAATGGTTGTTGAAAGTGTGAGGAAGTATCAAGATCCTTTAATAGAGAAGAGAGCACAACAATGGGCGAAAGGAACCAAGACAGTGAAAGAAGACTTGCTTGATGTCATGATCTCTCTCCAGAGTGAAGCGGGCATGACTTTGTTGTCCGTTGATGAGATTAAAGCCCAAGTTATTGAAATGATGGTGGCATCAGTGGACAATCCATCGAATGCAGTTGAGTGGGCACTTGCAGAAATGATAAATCAAACTGAGACACTTCAAAGGGCAGTAGAAGAATTGGATAGAGTGGTAGGGGCACATAGGTTGGTCCAGGAATCAGATTTGCCAAAGCTGAACTACATTAAGTCATGTGTAAGGGAGGCCTTTAGACTCCATCCTTTTGTACCTTTTAATGTCCCGCATGTATCCATGTCTGATACGGCAGTCGCTGGCTACTTCATACCAAAGGGTAGCCATGTGCTTTTGAGTCGATCAGGTCTTGGACGCAACCCAAAAATCTGGGATGACCCATTGACCTTTAATCCAGAGCGACACCTGAGGGACGATGGATCTGAAGTGGTACTAACTGAGTCAGAGCTTTGTCTTTTGTCTTTTAGTAGTGGGCGAAGAGGGTGCACAGGAGTGTTGTTGGGTTCAACAATGACAACAATGCTACTAGCGAGACTTCTTCAATGCTTCACCTGGAGCGCTCCACCTACCGAGCCACACATTGACCTTAGTGAGTCATATGACAGTTTGGGTATGGCGAAACCTTTGCATGCACACGCCAGGCCGCGTTTGGGAGATAAT

Network for GWHGAAZE020600

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	14	298	1.80E-61

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K12153	CYP79A2	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		2-Oxocarboxylic acid metabolism	map01210
		Cyanoamino acid metabolism	map00460
		Glucosinolate biosynthesis	map00966

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	0.126
	SRR3591711	White flower	0.285
	SRR3591712	Green floral bud	0.000
	SRR3591713	Yellow flower	0.756
SRP173429	SRR8316895	Juvenile bud stage	0.000
	SRR8316896	Juvenile bud stage	0.000
	SRR8316897	Juvenile bud stage	0.033
	SRR8316894	Third green stage	0.000
	SRR8316900	Third green stage	0.000
	SRR8316901	Third green stage	0.000
	SRR8316898	Complete white stage	0.369
	SRR8316899	Complete white stage	0.000
	SRR8316903	Complete white stage	0.019
	SRR8316902	Silver flowering stage	117.579
	SRR8316904	Silver flowering stage	143.324
	SRR8316905	Silver flowering stage	112.659
	SRR8316906	Gold flowering stage	436.999
	SRR8316907	Gold flowering stage	403.616
	SRR8316908	Gold flowering stage	251.874
SRP132670	SRR6706286	Control	0.000
	SRR6706287	Light intensity 50%	0.000
	SRR6706288	Light intensity 20%	0.000
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.004
	CNS0095593	Slightly white alabastrum(diploid) 2	0.000
	CNS0095594	Slightly white alabastrum(diploid) 3	0.066
	CNS0095595	Whole white alabastrum(diploid) 2	0.091
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.146
	CNS0095598	Silvery flower (diploied) 1	5.643
	CNS0095599	Silvery flower (diploied) 2	2.802
	CNS0095600	Silvery flower (diploied) 3	53.730
	CNS0095601	Golden flower (diploid) 1	23.952
	CNS0095602	Golden flower (diploid) 2	42.940
	CNS0095603	Golden flower (diploid) 3	43.772
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.142
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.000
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.000
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.253
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.048
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.000
	CNS0095610	Silvery flower (tetraploid) 1	40.978
	CNS0095611	Silvery flower (tetraploid) 2	72.302
	CNS0095612	Silvery flower (tetraploid) 3	731.222
	CNS0095613	Golden flower (tetraploid) 1	145.341
	CNS0095614	Golden flower (tetraploid) 2	69.610
	CNS0095615	Golden flower (tetraploid) 3	160.165
CRA001975	CRR073297	Stem 1	0.331
	CRR073298	Stem 2	0.569
	CRR073299	Stem 3	0.425
	CRR073300	Leaf 1	0.515
	CRR073301	Leaf 2	0.635
	CRR073302	Leaf 3	0.573
	CRR073303	Juvenile bud 1	0.366
	CRR073304	Juvenile bud 2	0.265
	CRR073305	Juvenile bud 3	0.427
	CRR073306	Third green 1	658.702
	CRR073307	Third green 2	302.936
	CRR073308	Third green 3	380.468
	CRR073309	Second white 1	1036.473
	CRR073310	Second white 2	911.635
	CRR073311	Second white 3	938.852
	CRR073312	Silver flowering 1	704.762
	CRR073313	Silver flowering 2	634.740
	CRR073314	Silver flowering 3	554.597
	CRR073315	Gold flowering 1	0.088
	CRR073316	Gold flowering 2	0.043
	CRR073317	Gold flowering 3	0.005
	CRR073318	Tawny withering 1	0.036
	CRR073319	Tawny withering 2	0.012
	CRR073320	Tawny withering 3	0.047