Detail information of GWHGAAZE020477


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008222616.13.4897E-175PREDICTED: PTI1-like tyrosine-protein kinase 3 isoform X2 [Prunus mume]
COGYP_003523895.15E-23serine/threonine protein kinase
Swissprottr|B9DFG5|PTI13_ARATH3E-163PTI1-like tyrosine-protein kinase 3
trEMBLtr|M5XBG7|M5XBG7_PRUPE3E-175Uncharacterized protein {ECO:0000313|EMBL:EMJ23284.1}
TAIR10AT3G59350.23E-131Protein kinase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene60899156093548-
GWHAAZE00000006mRNA60899156093548-
GWHAAZE00000006exon60932556093548-
GWHAAZE00000006exon60930026093128-
GWHAAZE00000006exon60922516092524-
GWHAAZE00000006exon60899156090068-
GWHAAZE00000006CDS60932556093548-
GWHAAZE00000006CDS60930026093128-
GWHAAZE00000006CDS60922516092524-
GWHAAZE00000006CDS60899156090068-
Transcript Sequence

Network for GWHGAAZE020477

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.18PK_Tyr_Ser-Thr582661.80E-44
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_RLCK-VIII

KEGG pathway

KO Enzyme pathway mapID
K13436PTI1 Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0004713molecular_functionprotein tyrosine kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf35.715
SRR3591706second leaf14.178
SRR3591707mature leaf13.573
SRR3591708Shoot apex18.254
SRR3591709Stem36.015
SRR3591710White floral bud37.642
SRR3591711White flower36.331
SRR3591712Green floral bud29.249
SRR3591713Yellow flower35.230
SRP173429 SRR8316895Juvenile bud stage 47.773
SRR8316896Juvenile bud stage 47.110
SRR8316897Juvenile bud stage 18.411
SRR8316894Third green stage 14.428
SRR8316900Third green stage 43.547
SRR8316901Third green stage 45.169
SRR8316898Complete white stage 21.467
SRR8316899Complete white stage 59.847
SRR8316903Complete white stage 39.606
SRR8316902Silver flowering stage33.808
SRR8316904Silver flowering stage40.922
SRR8316905Silver flowering stage22.116
SRR8316906Gold flowering stage 77.815
SRR8316907Gold flowering stage 81.876
SRR8316908Gold flowering stage 67.749
SRP132670SRR6706286Control42.800
SRR6706287Light intensity 50%44.068
SRR6706288Light intensity 20%42.694
CNP0000432CNS0095592Slightly white alabastrum(diploid) 126.329
CNS0095593Slightly white alabastrum(diploid) 226.349
CNS0095594Slightly white alabastrum(diploid) 327.507
CNS0095595Whole white alabastrum(diploid) 223.305
CNS0095596Whole white alabastrum(diploid) 320.783
CNS0095597Whole white alabastrum(diploid) 421.748
CNS0095598Silvery flower (diploied) 127.097
CNS0095599Silvery flower (diploied) 223.741
CNS0095600Silvery flower (diploied) 347.553
CNS0095601Golden flower (diploid) 126.124
CNS0095602Golden flower (diploid) 244.780
CNS0095603Golden flower (diploid) 346.441
CNS0095604Slightly white alabastrum(tetraploid) 126.364
CNS0095605Slightly white alabastrum(tetraploid) 220.445
CNS0095606Slightly white alabastrum(tetraploid) 339.696
CNS0095607Whole white alabastrum(tetraploid) 121.454
CNS0095608Whole white alabastrum(tetraploid) 224.476
CNS0095609Whole white alabastrum(tetraploid) 329.533
CNS0095610Silvery flower (tetraploid) 155.501
CNS0095611Silvery flower (tetraploid) 244.512
CNS0095612Silvery flower (tetraploid) 342.063
CNS0095613Golden flower (tetraploid) 138.833
CNS0095614Golden flower (tetraploid) 243.452
CNS0095615Golden flower (tetraploid) 352.189
CRA001975CRR073297Stem 187.367
CRR073298Stem 256.991
CRR073299Stem 370.147
CRR073300Leaf 156.575
CRR073301Leaf 257.156
CRR073302Leaf 348.466
CRR073303Juvenile bud 156.498
CRR073304Juvenile bud 258.390
CRR073305Juvenile bud 388.162
CRR073306Third green 1103.838
CRR073307Third green 2106.098
CRR073308Third green 395.994
CRR073309Second white 176.021
CRR073310Second white 276.083
CRR073311Second white 374.906
CRR073312Silver flowering 181.685
CRR073313Silver flowering 271.618
CRR073314Silver flowering 363.504
CRR073315Gold flowering 132.289
CRR073316Gold flowering 243.040
CRR073317Gold flowering 336.769
CRR073318Tawny withering 167.397
CRR073319Tawny withering 264.510
CRR073320Tawny withering 380.213