Detail information of GWHGAAZE020194


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP14242.10unnamed protein product [Coffea canephora]
COGYP_001958461.13E-26hypothetical protein Aasi_1443
Swissprottr|Q2MHE4|HT1_ARATH9E-56Serine/threonine-protein kinase HT1
trEMBLtr|A0A068V127|A0A068V127_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_81 {ECO:0000313|EMBL:CDP14242.1}
TAIR10AT4G31170.37E-117Protein kinase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene7975405679754958-
GWHAAZE00000005mRNA7975405679754958-
GWHAAZE00000005exon7975405679754958-
GWHAAZE00000005CDS7975405679754958-
Transcript Sequence

Network for GWHGAAZE020194

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0114Protein Kinases TKL-Pl-4 family Protein Kinases TKL-Pl-4


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.18PK_Tyr_Ser-Thr1343002.20E-38
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyTKL-Pl-4

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf119.746
SRR3591706second leaf70.627
SRR3591707mature leaf96.585
SRR3591708Shoot apex81.604
SRR3591709Stem137.097
SRR3591710White floral bud133.755
SRR3591711White flower186.719
SRR3591712Green floral bud101.523
SRR3591713Yellow flower147.141
SRP173429 SRR8316895Juvenile bud stage 49.231
SRR8316896Juvenile bud stage 60.595
SRR8316897Juvenile bud stage 31.401
SRR8316894Third green stage 30.105
SRR8316900Third green stage 74.512
SRR8316901Third green stage 77.862
SRR8316898Complete white stage 63.695
SRR8316899Complete white stage 161.391
SRR8316903Complete white stage 107.831
SRR8316902Silver flowering stage62.538
SRR8316904Silver flowering stage88.343
SRR8316905Silver flowering stage48.171
SRR8316906Gold flowering stage 165.819
SRR8316907Gold flowering stage 146.624
SRR8316908Gold flowering stage 180.591
SRP132670SRR6706286Control146.815
SRR6706287Light intensity 50%139.159
SRR6706288Light intensity 20%141.179
CNP0000432CNS0095592Slightly white alabastrum(diploid) 149.449
CNS0095593Slightly white alabastrum(diploid) 244.726
CNS0095594Slightly white alabastrum(diploid) 335.672
CNS0095595Whole white alabastrum(diploid) 238.102
CNS0095596Whole white alabastrum(diploid) 329.360
CNS0095597Whole white alabastrum(diploid) 433.413
CNS0095598Silvery flower (diploied) 161.584
CNS0095599Silvery flower (diploied) 260.631
CNS0095600Silvery flower (diploied) 3125.886
CNS0095601Golden flower (diploid) 160.094
CNS0095602Golden flower (diploid) 2115.938
CNS0095603Golden flower (diploid) 3114.585
CNS0095604Slightly white alabastrum(tetraploid) 145.669
CNS0095605Slightly white alabastrum(tetraploid) 236.082
CNS0095606Slightly white alabastrum(tetraploid) 398.667
CNS0095607Whole white alabastrum(tetraploid) 132.970
CNS0095608Whole white alabastrum(tetraploid) 225.939
CNS0095609Whole white alabastrum(tetraploid) 360.196
CNS0095610Silvery flower (tetraploid) 1125.522
CNS0095611Silvery flower (tetraploid) 2118.096
CNS0095612Silvery flower (tetraploid) 3135.425
CNS0095613Golden flower (tetraploid) 185.052
CNS0095614Golden flower (tetraploid) 2121.988
CNS0095615Golden flower (tetraploid) 3141.806
CRA001975CRR073297Stem 1106.380
CRR073298Stem 2106.568
CRR073299Stem 3119.049
CRR073300Leaf 1127.243
CRR073301Leaf 2117.688
CRR073302Leaf 3122.545
CRR073303Juvenile bud 1137.746
CRR073304Juvenile bud 2133.087
CRR073305Juvenile bud 3154.111
CRR073306Third green 1210.762
CRR073307Third green 2171.222
CRR073308Third green 3187.859
CRR073309Second white 1157.826
CRR073310Second white 2162.767
CRR073311Second white 3154.113
CRR073312Silver flowering 1175.798
CRR073313Silver flowering 2197.346
CRR073314Silver flowering 3163.273
CRR073315Gold flowering 1100.338
CRR073316Gold flowering 2134.333
CRR073317Gold flowering 3102.564
CRR073318Tawny withering 1157.629
CRR073319Tawny withering 2145.924
CRR073320Tawny withering 3153.605