Detail information of GWHGAAZE020193


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010656692.18.07556E-69PREDICTED: serine/threonine-protein kinase HT1-like [Vitis vinifera]
COGYP_007834776.10.0000002Serine/threonine protein kinase
Swissprottr|Q2MHE4|HT1_ARATH8E-32Serine/threonine-protein kinase HT1
trEMBLtr|F6H9N7|F6H9N7_VITVI3E-69Putative uncharacterized protein {ECO:0000313|EMBL:CCB48906.1}
TAIR10AT4G31170.31E-51Protein kinase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene7974851879750390-
GWHAAZE00000005mRNA7974851879750390-
GWHAAZE00000005exon7975033279750390-
GWHAAZE00000005exon7975009479750189-
GWHAAZE00000005exon7974851879748857-
GWHAAZE00000005five_prime_UTR7975033279750390-
GWHAAZE00000005five_prime_UTR7975009479750189-
GWHAAZE00000005five_prime_UTR7974885479748857-
GWHAAZE00000005CDS7974851879748853-
Transcript Sequence

Network for GWHGAAZE020193

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.18PK_Tyr_Ser-Thr2841.40E-20
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyTKL-Pl-4

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf91.691
SRR3591706second leaf52.645
SRR3591707mature leaf75.469
SRR3591708Shoot apex81.013
SRR3591709Stem122.374
SRR3591710White floral bud110.893
SRR3591711White flower143.701
SRR3591712Green floral bud104.693
SRR3591713Yellow flower121.071
SRP173429 SRR8316895Juvenile bud stage 49.883
SRR8316896Juvenile bud stage 63.081
SRR8316897Juvenile bud stage 33.301
SRR8316894Third green stage 27.241
SRR8316900Third green stage 87.470
SRR8316901Third green stage 88.019
SRR8316898Complete white stage 65.730
SRR8316899Complete white stage 145.155
SRR8316903Complete white stage 92.553
SRR8316902Silver flowering stage65.115
SRR8316904Silver flowering stage70.667
SRR8316905Silver flowering stage40.980
SRR8316906Gold flowering stage 147.384
SRR8316907Gold flowering stage 141.431
SRR8316908Gold flowering stage 154.899
SRP132670SRR6706286Control95.473
SRR6706287Light intensity 50%91.364
SRR6706288Light intensity 20%91.292
CNP0000432CNS0095592Slightly white alabastrum(diploid) 192.338
CNS0095593Slightly white alabastrum(diploid) 299.755
CNS0095594Slightly white alabastrum(diploid) 389.119
CNS0095595Whole white alabastrum(diploid) 264.518
CNS0095596Whole white alabastrum(diploid) 356.240
CNS0095597Whole white alabastrum(diploid) 469.071
CNS0095598Silvery flower (diploied) 1119.091
CNS0095599Silvery flower (diploied) 2105.181
CNS0095600Silvery flower (diploied) 3111.148
CNS0095601Golden flower (diploid) 1114.357
CNS0095602Golden flower (diploid) 2107.786
CNS0095603Golden flower (diploid) 397.474
CNS0095604Slightly white alabastrum(tetraploid) 162.551
CNS0095605Slightly white alabastrum(tetraploid) 265.637
CNS0095606Slightly white alabastrum(tetraploid) 399.713
CNS0095607Whole white alabastrum(tetraploid) 165.455
CNS0095608Whole white alabastrum(tetraploid) 258.304
CNS0095609Whole white alabastrum(tetraploid) 365.988
CNS0095610Silvery flower (tetraploid) 1143.945
CNS0095611Silvery flower (tetraploid) 2113.337
CNS0095612Silvery flower (tetraploid) 3137.781
CNS0095613Golden flower (tetraploid) 1123.990
CNS0095614Golden flower (tetraploid) 2126.508
CNS0095615Golden flower (tetraploid) 3127.183
CRA001975CRR073297Stem 1109.801
CRR073298Stem 2106.835
CRR073299Stem 3129.106
CRR073300Leaf 1117.679
CRR073301Leaf 2138.655
CRR073302Leaf 3110.392
CRR073303Juvenile bud 1157.180
CRR073304Juvenile bud 2124.611
CRR073305Juvenile bud 3152.485
CRR073306Third green 1192.249
CRR073307Third green 2176.557
CRR073308Third green 3174.367
CRR073309Second white 1147.679
CRR073310Second white 2151.991
CRR073311Second white 3129.172
CRR073312Silver flowering 1172.979
CRR073313Silver flowering 2175.940
CRR073314Silver flowering 3154.352
CRR073315Gold flowering 1121.010
CRR073316Gold flowering 2128.476
CRR073317Gold flowering 391.924
CRR073318Tawny withering 1223.053
CRR073319Tawny withering 2280.207
CRR073320Tawny withering 3202.427