Detail information of GWHGAAZE019592


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCBI36768.30unnamed protein product [Vitis vinifera]
Swissprottr|Q40541|NPK1_TOBAC0Mitogen-activated protein kinase kinase kinase NPK1
trEMBLtr|F6HYZ2|F6HYZ2_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB59906.1}
TAIR10AT3G06030.11E-123NPK1-related protein kinase 3

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene5342453353436334-
GWHAAZE00000005mRNA5342453353436334-
GWHAAZE00000005exon5342453353424650-
GWHAAZE00000005exon5342502953425354-
GWHAAZE00000005exon5342578753426023-
GWHAAZE00000005exon5342611853426223-
GWHAAZE00000005exon5342668553426734-
GWHAAZE00000005exon5342682653426882-
GWHAAZE00000005exon5342696353427002-
GWHAAZE00000005exon5342776653427794-
GWHAAZE00000005exon5342787953427960-
GWHAAZE00000005exon5343258953432671-
GWHAAZE00000005exon5343299953433076-
GWHAAZE00000005exon5343315453433234-
GWHAAZE00000005exon5343331153433421-
GWHAAZE00000005exon5343351053433575-
GWHAAZE00000005exon5343410053434141-
GWHAAZE00000005exon5343600253436334-
GWHAAZE00000005five_prime_UTR5343626053436334-
GWHAAZE00000005CDS5343600253436259-
GWHAAZE00000005CDS5343410053434141-
GWHAAZE00000005CDS5343351053433575-
GWHAAZE00000005CDS5343331153433421-
GWHAAZE00000005CDS5343315453433234-
GWHAAZE00000005CDS5343299953433076-
GWHAAZE00000005CDS5343258953432671-
GWHAAZE00000005CDS5342787953427960-
GWHAAZE00000005CDS5342776653427794-
GWHAAZE00000005CDS5342696353427002-
GWHAAZE00000005CDS5342682653426882-
GWHAAZE00000005CDS5342668553426734-
GWHAAZE00000005CDS5342611853426223-
GWHAAZE00000005CDS5342578753426023-
GWHAAZE00000005CDS5342502953425354-
GWHAAZE00000005CDS5342453353424650-
Transcript Sequence

Network for GWHGAAZE019592

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase582685.30E-61
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilySTE_STE11

KEGG pathway

KO Enzyme pathway mapID
K20606ANP1 MAPK signaling pathway - plant map04016

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0005524molecular_functionATP binding
GO:0004672molecular_functionprotein kinase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.309
SRR3591706second leaf1.276
SRR3591707mature leaf0.341
SRR3591708Shoot apex7.375
SRR3591709Stem2.867
SRR3591710White floral bud0.400
SRR3591711White flower0.232
SRR3591712Green floral bud1.069
SRR3591713Yellow flower0.110
SRP173429 SRR8316895Juvenile bud stage 2.338
SRR8316896Juvenile bud stage 3.489
SRR8316897Juvenile bud stage 1.888
SRR8316894Third green stage 1.168
SRR8316900Third green stage 1.701
SRR8316901Third green stage 1.415
SRR8316898Complete white stage 0.047
SRR8316899Complete white stage 1.189
SRR8316903Complete white stage 0.121
SRR8316902Silver flowering stage0.071
SRR8316904Silver flowering stage0.127
SRR8316905Silver flowering stage0.073
SRR8316906Gold flowering stage 0.031
SRR8316907Gold flowering stage 0.029
SRR8316908Gold flowering stage 0.345
SRP132670SRR6706286Control0.757
SRR6706287Light intensity 50%0.894
SRR6706288Light intensity 20%1.152
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.559
CNS0095593Slightly white alabastrum(diploid) 20.956
CNS0095594Slightly white alabastrum(diploid) 31.929
CNS0095595Whole white alabastrum(diploid) 21.048
CNS0095596Whole white alabastrum(diploid) 31.091
CNS0095597Whole white alabastrum(diploid) 40.595
CNS0095598Silvery flower (diploied) 10.613
CNS0095599Silvery flower (diploied) 20.374
CNS0095600Silvery flower (diploied) 30.177
CNS0095601Golden flower (diploid) 10.175
CNS0095602Golden flower (diploid) 20.193
CNS0095603Golden flower (diploid) 30.256
CNS0095604Slightly white alabastrum(tetraploid) 11.593
CNS0095605Slightly white alabastrum(tetraploid) 21.758
CNS0095606Slightly white alabastrum(tetraploid) 33.171
CNS0095607Whole white alabastrum(tetraploid) 10.790
CNS0095608Whole white alabastrum(tetraploid) 20.748
CNS0095609Whole white alabastrum(tetraploid) 31.145
CNS0095610Silvery flower (tetraploid) 10.129
CNS0095611Silvery flower (tetraploid) 20.226
CNS0095612Silvery flower (tetraploid) 30.280
CNS0095613Golden flower (tetraploid) 10.063
CNS0095614Golden flower (tetraploid) 20.054
CNS0095615Golden flower (tetraploid) 30.044
CRA001975CRR073297Stem 12.761
CRR073298Stem 22.752
CRR073299Stem 32.821
CRR073300Leaf 11.562
CRR073301Leaf 20.810
CRR073302Leaf 30.882
CRR073303Juvenile bud 10.886
CRR073304Juvenile bud 20.428
CRR073305Juvenile bud 31.076
CRR073306Third green 10.000
CRR073307Third green 20.087
CRR073308Third green 30.077
CRR073309Second white 10.382
CRR073310Second white 20.000
CRR073311Second white 30.034
CRR073312Silver flowering 10.010
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.053
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.089
CRR073317Gold flowering 30.634
CRR073318Tawny withering 12.419
CRR073319Tawny withering 22.106
CRR073320Tawny withering 32.841