Detail information of GWHGAAZE019451


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrEYU40452.10hypothetical protein MIMGU_mgv1a005328mg [Erythranthe guttata]
Swissprottr|Q43432|VATB1_GOSHI0V-type proton ATPase subunit B 1
trEMBLtr|A0A022RJ66|A0A022RJ66_ERYGU0Uncharacterized protein {ECO:0000313|EMBL:EYU40452.1}
TAIR10AT4G38510.50ATPase, V1 complex, subunit B protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene4361290543624485-
GWHAAZE00000005mRNA4361290543624485-
GWHAAZE00000005exon4361290543613090-
GWHAAZE00000005exon4361354043613623-
GWHAAZE00000005exon4361377343613826-
GWHAAZE00000005exon4361441943614466-
GWHAAZE00000005exon4361457443614656-
GWHAAZE00000005exon4361613843616288-
GWHAAZE00000005exon4361710543617242-
GWHAAZE00000005exon4361735343617481-
GWHAAZE00000005exon4361811943618327-
GWHAAZE00000005exon4361884743618958-
GWHAAZE00000005exon4361995943620018-
GWHAAZE00000005exon4362081443620912-
GWHAAZE00000005exon4362130643621361-
GWHAAZE00000005exon4362309743623161-
GWHAAZE00000005exon4362438743624485-
GWHAAZE00000005five_prime_UTR4362438743624485-
GWHAAZE00000005five_prime_UTR4362315543623161-
GWHAAZE00000005CDS4362309743623154-
GWHAAZE00000005CDS4362130643621361-
GWHAAZE00000005CDS4362081443620912-
GWHAAZE00000005CDS4361995943620018-
GWHAAZE00000005CDS4361884743618958-
GWHAAZE00000005CDS4361811943618327-
GWHAAZE00000005CDS4361735343617481-
GWHAAZE00000005CDS4361710543617242-
GWHAAZE00000005CDS4361613843616288-
GWHAAZE00000005CDS4361457443614656-
GWHAAZE00000005CDS4361441943614466-
GWHAAZE00000005CDS4361377343613826-
GWHAAZE00000005CDS4361354043613623-
GWHAAZE00000005CDS4361290543613090-
Transcript Sequence

Network for GWHGAAZE019451

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02874.24ATP-synt_ab_N24901.20E-13
PF00006.26ATP-synt_ab1473775.10E-64
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02147ATPeV1B, ATP6B Metabolic pathways map01100
Oxidative phosphorylationmap00190
mTOR signaling pathwaymap04150
Phagosomemap04145
Collecting duct acid secretionmap04966
Synaptic vesicle cyclemap04721

Gene Ontology

GO term OntologyName
GO:0046034biological_processATP metabolic process
GO:1902600biological_processproton transmembrane transport
GO:0033180cellular_componentproton-transporting V-type ATPase, V1 domain
GO:0005524molecular_functionATP binding

Expression pattern

Created with Highcharts 5.0.4Chart context menuExpression pattern for GWHGAAZE019451.youngest leafsecond leafmature leafShoot apexStemWhite floral budWhite flowerGreen floral budYellow flowerJuvenile bud stage 1Juvenile bud stage 2Juvenile bud stage 3Third green stage 1Third green stage 2Third green stage 3Complete white stage 1Complete white stage 2Complete white stage 3Silver flowering stage 1Silver flowering stage 2Silver flowering stage 3Gold flowering stage 1Gold flowering stage 2Gold flowering stage 3Control 1Light intensity 50%Light intensity 20%Slightly white alabastrum(diploid) 1Slightly white alabastrum(diploid) 2Slightly white alabastrum(diploid) 3Whole white alabastrum(diploid) 1Whole white alabastrum(diploid) 2Whole white alabastrum(diploid) 3Silvery flower (diploied) 1Silvery flower (diploied) 2Silvery flower (diploied) 3Golden flower (diploid) 1Golden flower (diploid) 2Golden flower (diploid) 3Slightly white alabastrum(tetraploid) 1Slightly white alabastrum(tetraploid) 2Slightly white alabastrum(tetraploid) 3Whole white alabastrum(tetraploid) 1Whole white alabastrum(tetraploid) 2Whole white alabastrum(tetraploid) 3Silvery flower (tetraploid) 1Silvery flower (tetraploid) 2Silvery flower (tetraploid) 3Golden flower (tetraploid) 1Golden flower (tetraploid) 2Golden flower (tetraploid) 3Stem 1Stem 2Stem 3Leaf 1Leaf 2Leaf 3Juvenile bud 1Juvenile bud 2Juvenile bud 3Third green 1Third green 2Third green 3Second white 1Second white 2Second white 3Silver flowering 1Silver flowering 2Silver flowering 3Gold flowering 1Gold flowering 2Gold flowering 3Tawny withering 1Tawny withering 2Tawny withering 30102030405060708090100110120130140150Highcharts.com

Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf107.143
SRR3591706second leaf48.751
SRR3591707mature leaf47.205
SRR3591708Shoot apex63.494
SRR3591709Stem66.366
SRR3591710White floral bud94.590
SRR3591711White flower96.751
SRR3591712Green floral bud102.165
SRR3591713Yellow flower80.295
SRP173429 SRR8316895Juvenile bud stage 61.153
SRR8316896Juvenile bud stage 82.409
SRR8316897Juvenile bud stage 44.426
SRR8316894Third green stage 33.999
SRR8316900Third green stage 105.513
SRR8316901Third green stage 107.679
SRR8316898Complete white stage 46.356
SRR8316899Complete white stage 106.678
SRR8316903Complete white stage 62.296
SRR8316902Silver flowering stage49.587
SRR8316904Silver flowering stage57.779
SRR8316905Silver flowering stage24.387
SRR8316906Gold flowering stage 80.690
SRR8316907Gold flowering stage 78.435
SRR8316908Gold flowering stage 98.019
SRP132670SRR6706286Control65.737
SRR6706287Light intensity 50%68.271
SRR6706288Light intensity 20%70.678
CNP0000432CNS0095592Slightly white alabastrum(diploid) 158.782
CNS0095593Slightly white alabastrum(diploid) 275.579
CNS0095594Slightly white alabastrum(diploid) 353.668
CNS0095595Whole white alabastrum(diploid) 263.328
CNS0095596Whole white alabastrum(diploid) 360.673
CNS0095597Whole white alabastrum(diploid) 456.092
CNS0095598Silvery flower (diploied) 181.888
CNS0095599Silvery flower (diploied) 270.354
CNS0095600Silvery flower (diploied) 398.808
CNS0095601Golden flower (diploid) 153.942
CNS0095602Golden flower (diploid) 2100.573
CNS0095603Golden flower (diploid) 394.047
CNS0095604Slightly white alabastrum(tetraploid) 181.327
CNS0095605Slightly white alabastrum(tetraploid) 271.712
CNS0095606Slightly white alabastrum(tetraploid) 3142.403
CNS0095607Whole white alabastrum(tetraploid) 158.658
CNS0095608Whole white alabastrum(tetraploid) 262.203
CNS0095609Whole white alabastrum(tetraploid) 3116.949
CNS0095610Silvery flower (tetraploid) 1109.045
CNS0095611Silvery flower (tetraploid) 298.935
CNS0095612Silvery flower (tetraploid) 376.032
CNS0095613Golden flower (tetraploid) 163.307
CNS0095614Golden flower (tetraploid) 299.580
CNS0095615Golden flower (tetraploid) 355.824
CRA001975CRR073297Stem 194.677
CRR073298Stem 283.933
CRR073299Stem 392.510
CRR073300Leaf 187.681
CRR073301Leaf 282.968
CRR073302Leaf 392.433
CRR073303Juvenile bud 199.632
CRR073304Juvenile bud 285.962
CRR073305Juvenile bud 378.048
CRR073306Third green 141.847
CRR073307Third green 244.724
CRR073308Third green 343.016
CRR073309Second white 162.571
CRR073310Second white 250.728
CRR073311Second white 345.573
CRR073312Silver flowering 152.124
CRR073313Silver flowering 246.526
CRR073314Silver flowering 341.740
CRR073315Gold flowering 162.406
CRR073316Gold flowering 271.193
CRR073317Gold flowering 354.791
CRR073318Tawny withering 179.063
CRR073319Tawny withering 273.016
CRR073320Tawny withering 383.799