Detail information of GWHGAAZE019213


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008358594.11.86273E-48PREDICTED: transcription factor bHLH35-like [Malus domestica]
Swissprottr|Q700E3|BH027_ARATH6E-34Transcription factor bHLH27
trEMBLtr|K7LC25|K7LC25_SOYBN4E-47Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G06770.2}
TAIR10AT4G29930.21E-21basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene3420356534204523+
GWHAAZE00000005mRNA3420356534204523+
GWHAAZE00000005exon3420356534203638+
GWHAAZE00000005exon3420427234204437+
GWHAAZE00000005exon3420450934204523+
GWHAAZE00000005CDS3420356534203638+
GWHAAZE00000005CDS3420427234204437+
GWHAAZE00000005CDS3420450934204523+
Transcript Sequence

Network for GWHGAAZE019213

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00010.27HLH55764.20E-05
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybHLH

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046983molecular_functionprotein dimerization activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf28.496
SRR3591706second leaf5.100
SRR3591707mature leaf17.676
SRR3591708Shoot apex16.430
SRR3591709Stem34.122
SRR3591710White floral bud17.157
SRR3591711White flower27.193
SRR3591712Green floral bud11.882
SRR3591713Yellow flower28.467
SRP173429 SRR8316895Juvenile bud stage 26.623
SRR8316896Juvenile bud stage 15.438
SRR8316897Juvenile bud stage 14.732
SRR8316894Third green stage 1.232
SRR8316900Third green stage 0.844
SRR8316901Third green stage 6.076
SRR8316898Complete white stage 4.124
SRR8316899Complete white stage 25.081
SRR8316903Complete white stage 12.350
SRR8316902Silver flowering stage6.871
SRR8316904Silver flowering stage14.029
SRR8316905Silver flowering stage7.847
SRR8316906Gold flowering stage 21.591
SRR8316907Gold flowering stage 20.698
SRR8316908Gold flowering stage 22.550
SRP132670SRR6706286Control19.623
SRR6706287Light intensity 50%21.514
SRR6706288Light intensity 20%16.068
CNP0000432CNS0095592Slightly white alabastrum(diploid) 114.956
CNS0095593Slightly white alabastrum(diploid) 29.790
CNS0095594Slightly white alabastrum(diploid) 324.587
CNS0095595Whole white alabastrum(diploid) 215.332
CNS0095596Whole white alabastrum(diploid) 31.916
CNS0095597Whole white alabastrum(diploid) 411.549
CNS0095598Silvery flower (diploied) 121.857
CNS0095599Silvery flower (diploied) 237.492
CNS0095600Silvery flower (diploied) 325.114
CNS0095601Golden flower (diploid) 167.731
CNS0095602Golden flower (diploid) 256.938
CNS0095603Golden flower (diploid) 350.365
CNS0095604Slightly white alabastrum(tetraploid) 11.751
CNS0095605Slightly white alabastrum(tetraploid) 21.812
CNS0095606Slightly white alabastrum(tetraploid) 310.489
CNS0095607Whole white alabastrum(tetraploid) 13.322
CNS0095608Whole white alabastrum(tetraploid) 20.892
CNS0095609Whole white alabastrum(tetraploid) 33.364
CNS0095610Silvery flower (tetraploid) 125.028
CNS0095611Silvery flower (tetraploid) 218.437
CNS0095612Silvery flower (tetraploid) 313.133
CNS0095613Golden flower (tetraploid) 121.301
CNS0095614Golden flower (tetraploid) 222.860
CNS0095615Golden flower (tetraploid) 34.293
CRA001975CRR073297Stem 123.012
CRR073298Stem 217.781
CRR073299Stem 311.767
CRR073300Leaf 17.042
CRR073301Leaf 26.889
CRR073302Leaf 310.286
CRR073303Juvenile bud 13.859
CRR073304Juvenile bud 213.463
CRR073305Juvenile bud 32.122
CRR073306Third green 118.686
CRR073307Third green 214.072
CRR073308Third green 316.015
CRR073309Second white 12.353
CRR073310Second white 23.023
CRR073311Second white 31.489
CRR073312Silver flowering 13.876
CRR073313Silver flowering 25.905
CRR073314Silver flowering 33.472
CRR073315Gold flowering 115.015
CRR073316Gold flowering 231.394
CRR073317Gold flowering 322.472
CRR073318Tawny withering 176.187
CRR073319Tawny withering 2163.656
CRR073320Tawny withering 351.502