Gene detail

Detail information of GWHGAAZE018936

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010659134.1	1.71317E-83	PREDICTED: abscisic acid receptor PYL8-like [Vitis vinifera]
Swissprot	tr\|Q9FGM1\|PYL8_ARATH	6E-79	Abscisic acid receptor PYL8
trEMBL	tr\|D7TVE7\|D7TVE7_VITVI	1E-83	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI34472.3}
TAIR10	AT5G53160.2	8E-68	regulatory components of ABA receptor 3

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000005	gene	27428590	27434529	+
GWHAAZE00000005	mRNA	27428590	27434529	+
GWHAAZE00000005	exon	27428590	27428600	+
GWHAAZE00000005	exon	27428687	27428975	+
GWHAAZE00000005	exon	27429213	27429583	+
GWHAAZE00000005	exon	27429700	27429952	+
GWHAAZE00000005	exon	27430644	27431011	+
GWHAAZE00000005	exon	27433283	27434457	+
GWHAAZE00000005	exon	27434525	27434529	+
GWHAAZE00000005	CDS	27428590	27428600	+
GWHAAZE00000005	CDS	27428687	27428975	+
GWHAAZE00000005	CDS	27429213	27429583	+
GWHAAZE00000005	CDS	27429700	27429952	+
GWHAAZE00000005	CDS	27430644	27431011	+
GWHAAZE00000005	CDS	27433283	27434457	+
GWHAAZE00000005	CDS	27434525	27434529	+

Transcript Sequence
>GWHTAAZE018958 ATGGGAAAAAGCCACCATTCCAACAATAATACATTTAACAACTCTCACACGTTCACTTTAGTTTCTCTACTTTCCGGCCACCGATTTACCCCTCTCCTACCGGCGAAAGCACAGATGGCGAGTAAAGAATACGAATTTCTCCGAAAACACCACAAGCACGAGGTTGGAGAGAATCAATGTAGCTCGTACCTCGTTAAACGAATTAAAGCCCCTATCGACCTCGTTTGGTCTTTAGTGAGAAGATTCGATCAACCGCAGTGTTACAAGCCCTTTGTCACCAATTGTTATTGCGATGTGAAGGGGGACCTTAACGTTGGAAGTGTTAGAGAAGTGAAAGTATCGCCAGGATTACCGGCCTCTACCAGCACGGAGAGGCTGGAGATTCTGGACGACGAGGAACATGTATTTGGTGTGAGGACTGTTGCTGGTGATCACAGGTTGAAGAATTATACGTCGATCGTGACCGTGCATTCCGAGATGGTTGATGGACAGCCGGGAACGTTGGTGGTCGAGTCGTTTGTTGTGGATGTGCCCGATGGGAACACTAAAGATGAAACTTGCTATTTTGTAGAGGCAGTAATCAAAGTCAACCTTAAGTCACTGGCAGATGTCTCGGAACGTTTGGCTGCGAAAGACCCAATGGGGTTCACTGTAGGGTCCAATCCTGGCGGGATGAAGCGTCAAAATACAACACTTTCCGGCCACCGATTTACCCCTCTCCTACCGGCAAAAGCACAGATGGCGGGTAATGAATATGAATTTCTCCGAAAACACCACAAGCACGAGGTTGGAGAGAATCAGTGTAGCTCGTACCTCGTCAAAAGAATTAAAGCTCCTATCGACCTCGTTTGGTCTTTAGTGAGAAGATTCGATCAACCGCAGTGTTACAAGCCCTTTGTCACCGATTGTTATTGTGATGTGCAGGGGGACGTTAAGGTTGGGAGTGTTAGAGAAGTGAAAGTACAGTCAGGATTTCCGGCCTCTACCAGCACGGAGAGGCTGGAGATTCTGGACGATGAGGAACATGTATTTGGTGTGAGGACTGTTGCTGGTGATCACAGGTTGAAGAATTATACTTCAACCGTGACCGTTCATTCAGAGATGGTAGATGGACAGCCAGGAACGTTGGTGGTCCAGTCGTTTGTTGTGGATGTGCCGGATGGGAACACTAAAGACGAAACTTGCTATTTTGCAGAGGCATTAATCAAATGCAACCTTAAGTCACTGGCTGATGTCTCGGAAAGTTTGGCTGCAAAACCAAGGGGATTCACTGGAGGGTCCAATCCTGGCAGCCATGAGTTAGAATCCAAATCAACAGCTGGAATAGTTGAAGATAAGCTGAAGAGCACCAGACAAGACGGACAAAATACTGTTCCAATGGAAGTAGAAAGTGAAGCCGAGTTTTCAAATCAAGAGGCGTCGAGTTTGTCTGTGGAGTGGACTTCTCCTGAGGTCAGCTTAACAAATGGTAGATGCTCAGAGCTACCAGAGAAACCCAACTGCCCCTTCCTAGTAAAATTGTTCTTGCAACACAACCCTTACTTGACCGAGATTCCACTCTCATTCTTTGAGAACATGCCTGTCCTTCGAGTTCTTGATATTTCACACACCAGCATAAAAACTTTGCCTTTATCCATTTGCAAAGTACTTAGACTCCGGGAATTGTATTTGAGAGGCTGCAAAATGTTGATGCAATTACCACCCGAGATTGGACGTCTTACAAACCTCAAAGTACTTGACCTTGAAGGAACCGAGCTTGTATGTCTTCCTAAACAAATTGGATGGCTACTTCAACTGGAACACTTGCAGTTCTCCTTGTACAGATTTGCAGACCGCCATTTAGAAAGTATTAACGGAATTGAGAGGTCAATAATCCCAAGGGAGACACTATCAAAACTCACTAGTTTGAAGGAATTAAGCATCGATGTGGATCCAGAGTGCGAGTGGTGGGATGCAGAGGTGGAAGCTATCATTAGTGATTTGGGCAAGTTGGGAAACTTGGAAATGCTTAAATTGTATTTTCCAACAGTTGAACTATTTCAACAATTACAACAACGTCGCTGTGTTCAGAGACTTGAATGGGATATAGCTATGCCTATGATATATCCAACTTTGTCTAATTTTAGGTTCATTGTTGGCCGCCATGAAGATCATATAATGTCTTCGGTACCACGTGACCTTCAATATGAGTTTGTGAAACTAGAGAAATGCTTCAGATATGTTAATGGGGTGCGAGACTCGGATGCTATTACAAAAGCTCTCGAACATGTCGGGGCTTTGTTCCTTGACCGCCACTGGACTATTGAGAGGCTATCCGTATCTGACATGGAAAGGATGAATAAGTTGAAATTTTGCTTGATAGCAGAATGTAATGAGATGAGAGCGATTCTGGGTGGGCCCACCTTCTATCGAGAATTAGAAAAAGATAGTGGCAGAGAACCAATACTCGGATCACTATGTTACTTAGCCTAA

Network for GWHGAAZE018936

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF10604.10	Polyketide_cyc2	65	206	2.70E-16
PF10604.10	Polyketide_cyc2	273	414	3.30E-18
PF13855.7	LRR_8	504	561	4.80E-09

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K14496	PYL	MAPK signaling pathway - plant	map04016
K14496	PYL	Plant hormone signal transduction	map04075

Gene Ontology

GO term	Ontology	Name
GO:0005515	molecular_function	protein binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	1.083
	SRR3591706	second leaf	0.292
	SRR3591707	mature leaf	0.461
	SRR3591708	Shoot apex	0.218
	SRR3591709	Stem	1.456
	SRR3591710	White floral bud	1.172
	SRR3591711	White flower	0.858
	SRR3591712	Green floral bud	0.760
	SRR3591713	Yellow flower	0.498
SRP173429	SRR8316895	Juvenile bud stage	0.801
	SRR8316896	Juvenile bud stage	0.592
	SRR8316897	Juvenile bud stage	0.173
	SRR8316894	Third green stage	0.369
	SRR8316900	Third green stage	0.593
	SRR8316901	Third green stage	0.544
	SRR8316898	Complete white stage	0.568
	SRR8316899	Complete white stage	1.919
	SRR8316903	Complete white stage	1.369
	SRR8316902	Silver flowering stage	0.202
	SRR8316904	Silver flowering stage	1.062
	SRR8316905	Silver flowering stage	0.496
	SRR8316906	Gold flowering stage	0.585
	SRR8316907	Gold flowering stage	0.628
	SRR8316908	Gold flowering stage	0.593
SRP132670	SRR6706286	Control	1.162
	SRR6706287	Light intensity 50%	1.288
	SRR6706288	Light intensity 20%	1.396
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.388
	CNS0095593	Slightly white alabastrum(diploid) 2	0.293
	CNS0095594	Slightly white alabastrum(diploid) 3	0.178
	CNS0095595	Whole white alabastrum(diploid) 2	0.248
	CNS0095596	Whole white alabastrum(diploid) 3	0.137
	CNS0095597	Whole white alabastrum(diploid) 4	0.324
	CNS0095598	Silvery flower (diploied) 1	0.597
	CNS0095599	Silvery flower (diploied) 2	0.225
	CNS0095600	Silvery flower (diploied) 3	1.255
	CNS0095601	Golden flower (diploid) 1	0.356
	CNS0095602	Golden flower (diploid) 2	0.999
	CNS0095603	Golden flower (diploid) 3	0.830
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.400
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.205
	CNS0095606	Slightly white alabastrum(tetraploid) 3	1.470
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.125
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.018
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.604
	CNS0095610	Silvery flower (tetraploid) 1	1.254
	CNS0095611	Silvery flower (tetraploid) 2	1.198
	CNS0095612	Silvery flower (tetraploid) 3	1.148
	CNS0095613	Golden flower (tetraploid) 1	0.093
	CNS0095614	Golden flower (tetraploid) 2	0.393
	CNS0095615	Golden flower (tetraploid) 3	0.303
CRA001975	CRR073297	Stem 1	0.722
	CRR073298	Stem 2	0.841
	CRR073299	Stem 3	0.996
	CRR073300	Leaf 1	1.386
	CRR073301	Leaf 2	0.776
	CRR073302	Leaf 3	1.299
	CRR073303	Juvenile bud 1	0.709
	CRR073304	Juvenile bud 2	0.947
	CRR073305	Juvenile bud 3	1.464
	CRR073306	Third green 1	0.834
	CRR073307	Third green 2	0.742
	CRR073308	Third green 3	1.024
	CRR073309	Second white 1	0.287
	CRR073310	Second white 2	0.250
	CRR073311	Second white 3	0.230
	CRR073312	Silver flowering 1	0.063
	CRR073313	Silver flowering 2	0.274
	CRR073314	Silver flowering 3	0.073
	CRR073315	Gold flowering 1	0.026
	CRR073316	Gold flowering 2	0.255
	CRR073317	Gold flowering 3	0.102
	CRR073318	Tawny withering 1	1.659
	CRR073319	Tawny withering 2	0.579
	CRR073320	Tawny withering 3	2.263