Gene detail

Detail information of GWHGAAZE018840

Functional Annotation

Database	Orthologs	Annotation
Nr	AJA90807.1	UDP glucose: glycoprotein glucosyltransferase protein [Camellia sinensis]
Swissprot	tr\|Q0WL80\|UGGG_ARATH	UDP-glucose:glycoprotein glucosyltransferase (Precursor)
trEMBL	tr\|A0A067KV48\|A0A067KV48_JATCU	Uncharacterized protein {ECO:0000313\|EMBL:KDP38843.1}
TAIR10	AT1G71220.1	UDP-glucose:glycoprotein glucosyltransferases;transferases, transferring hexosyl groups;transferases, transferring glycosyl groups

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000005	gene	25341272	25348152	+
GWHAAZE00000005	mRNA	25341272	25348152	+
GWHAAZE00000005	exon	25341272	25341444	+
GWHAAZE00000005	exon	25342940	25343365	+
GWHAAZE00000005	exon	25343899	25344052	+
GWHAAZE00000005	exon	25344309	25344480	+
GWHAAZE00000005	exon	25344766	25344839	+
GWHAAZE00000005	exon	25345551	25345647	+
GWHAAZE00000005	exon	25345757	25345869	+
GWHAAZE00000005	exon	25346038	25346153	+
GWHAAZE00000005	exon	25346613	25346670	+
GWHAAZE00000005	exon	25346838	25346990	+
GWHAAZE00000005	exon	25347088	25347186	+
GWHAAZE00000005	exon	25347481	25347697	+
GWHAAZE00000005	exon	25348142	25348152	+
GWHAAZE00000005	CDS	25341272	25341444	+
GWHAAZE00000005	CDS	25342940	25343365	+
GWHAAZE00000005	CDS	25343899	25344052	+
GWHAAZE00000005	CDS	25344309	25344480	+
GWHAAZE00000005	CDS	25344766	25344839	+
GWHAAZE00000005	CDS	25345551	25345647	+
GWHAAZE00000005	CDS	25345757	25345869	+
GWHAAZE00000005	CDS	25346038	25346153	+
GWHAAZE00000005	CDS	25346613	25346670	+
GWHAAZE00000005	CDS	25346838	25346990	+
GWHAAZE00000005	CDS	25347088	25347186	+
GWHAAZE00000005	CDS	25347481	25347697	+
GWHAAZE00000005	CDS	25348142	25348152	+

Transcript Sequence
>GWHTAAZE018862 ATGGAGACCCGTCTCAGATCTGGGTTTTGGGTACTAATCACCACGGCTGTTTGCATTAGCCTCCTCCTCTGTGGTGGGTTTTCTTCAGTTTCTGCCGAGACTCGCCGACCCAAGAACGTACAGGTCGCTCTTCGGGCCAAGTGGTCCGGTACCTCACTCCTTCTAGAAGCTGGGGAATTGCTATCTCAAGAATGGAAAGATCTTTTCTGGGATTTCACTGAGGCATGGCTTCATAACGAGAGTAAAGTTTCAGATTCTTATACAGCCAAAGATTGTTTAAAGAAAATTGTAAATTATGGGAGAAATCTTATTAGTGAACCTCTGGCATCGGTTTTCGAATTTACTCTTACTCTTCGGTCAGCATCCCCAAGATTAGTCCTTTACCAGCAATTGGCAGAGGAATCTCTTTCTTCTTTTCCACTAGTTGATGACATTAACTCATATTCTGAAATCGAGGAAAGAAAAGGGCTGATTCTTTGCTTGTGGGCATTAACCCAAAAAGTCCCGGGGGAAATTGTTGTTGGGTGGATACTGGTGGGGCTCTCTATTTTGATGTCAAAGATTTGCTACCGTGGCTTCGTAGCTCAACTAAACCGTAAGGGTGGGAATGAATTTCAGCAACCCGAATTGTTTGAATTTGATCATGTTCATTTTGAGTCCAGTACTGGAAGTCCAGTTGTTATTTTATATGGAGCTCTTGGAACTGACTGCTTTAGGGAGTTTCATTTCACCTTGGTCGAAGCAGCCAAAGAGGGAAAAGTTAAGTATGTTGTAAGACCTGTATTGCCTACTGGCTGTGAATCAAAAAGTGGCCATTGTGGTGCCATCGGTACGAGAGATGCATTGAATTTGGGTGGTTATGGTGTAGAACTTGCTTTGAAGAACATGGAGTACAAGGCTATGGATGACAGTGCTATAAAGAAAGGCGTCACTCTTGAAGATCCTCACACAGAAGATCTCAGCCAAGAAGTTAGAGGGTTCATATTCTCTAGAATTCTGGAACGTAAACCTGACCTAACATCTGAAATAATGGCTTTTAGAGATGATCTTTTGTCTTCAACAATATCTGATACGCTTAATGTGTGGGAATTAAAGGATTTAGGACATCAGACTGCTCAGAAAATCGTTCACGCCTCTGACCCTCTGCAGTCAATGCAAGATATAAATCAAAATTTCCCAAGTATTGTCTCTACCTTGTCTCGTATGAAGCTCAATGATTCCATTAAAGATGAAATTCTTGCAAACCAGCGAATGATCCCGCCGGGCAAGTCTTTAATGGCTCTGAATGGTGCTTTAATCGATATTGAAGATGTTGATCTTTATCTGTTGGTTGACATGGTCCATCAGGATTTATCTTTGGCTGATCAGTATTCAAAGTTGGGGATTCCTTCAAGCACAATTCGGAAACTTTTATCTACTTTACCTCCTTCGGAGTCCAGTATGTTCCGTGTTGATTTCCGTTCTACGCATGTTCATTACCTCAATAATCTGGAAGTGGACCCCATGTACAAGAGATGGCGCAACAATCTAAATGAGATTTTGATGCCAGTCTATCCCGGGCAACTTCGTTACATTCGCAAAAATCTGTTCTATGCTGTTTTTGTTTTGGATCCTGGCTCTGTTTGCGGACTTGAGACTATAGACATGATTATGTCTCTGTTTGAGAATAATACTCCTATGAGGTTTGGGGTACTTTTGTACTCTACAAAGTTTATCGAGAAGGTTGAATCAAATGGCGGTGAATTCCCATTTACTCGTACAGAGAACAACAATCAAATTGGGGAAGATTTATCTGGCTTGGTATTTGCTTCTCTCTCTAGTTCTTTTGATTTTTTTCTTCAGCTTAATTATTGCAGCAACTAG

Network for GWHGAAZE018840

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF18400.2	Thioredoxin_12	51	269	2.10E-52
PF18401.2	Thioredoxin_13	356	472	1.80E-33
PF18402.2	Thioredoxin_14	484	586	2.50E-28

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K11718	HUGT	Protein processing in endoplasmic reticulum	map04141

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	34.211
	SRR3591706	second leaf	20.174
	SRR3591707	mature leaf	16.358
	SRR3591708	Shoot apex	18.533
	SRR3591709	Stem	16.029
	SRR3591710	White floral bud	22.847
	SRR3591711	White flower	36.130
	SRR3591712	Green floral bud	19.805
	SRR3591713	Yellow flower	18.953
SRP173429	SRR8316895	Juvenile bud stage	20.655
	SRR8316896	Juvenile bud stage	24.648
	SRR8316897	Juvenile bud stage	12.331
	SRR8316894	Third green stage	13.591
	SRR8316900	Third green stage	26.328
	SRR8316901	Third green stage	22.013
	SRR8316898	Complete white stage	6.799
	SRR8316899	Complete white stage	17.365
	SRR8316903	Complete white stage	21.091
	SRR8316902	Silver flowering stage	12.933
	SRR8316904	Silver flowering stage	27.276
	SRR8316905	Silver flowering stage	11.346
	SRR8316906	Gold flowering stage	31.569
	SRR8316907	Gold flowering stage	31.109
	SRR8316908	Gold flowering stage	36.266
SRP132670	SRR6706286	Control	24.137
	SRR6706287	Light intensity 50%	24.517
	SRR6706288	Light intensity 20%	25.841
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	5.660
	CNS0095593	Slightly white alabastrum(diploid) 2	3.611
	CNS0095594	Slightly white alabastrum(diploid) 3	5.808
	CNS0095595	Whole white alabastrum(diploid) 2	6.053
	CNS0095596	Whole white alabastrum(diploid) 3	4.485
	CNS0095597	Whole white alabastrum(diploid) 4	6.747
	CNS0095598	Silvery flower (diploied) 1	11.346
	CNS0095599	Silvery flower (diploied) 2	9.892
	CNS0095600	Silvery flower (diploied) 3	30.672
	CNS0095601	Golden flower (diploid) 1	7.062
	CNS0095602	Golden flower (diploid) 2	30.565
	CNS0095603	Golden flower (diploid) 3	29.597
	CNS0095604	Slightly white alabastrum(tetraploid) 1	9.363
	CNS0095605	Slightly white alabastrum(tetraploid) 2	5.977
	CNS0095606	Slightly white alabastrum(tetraploid) 3	29.452
	CNS0095607	Whole white alabastrum(tetraploid) 1	5.900
	CNS0095608	Whole white alabastrum(tetraploid) 2	5.953
	CNS0095609	Whole white alabastrum(tetraploid) 3	23.209
	CNS0095610	Silvery flower (tetraploid) 1	32.121
	CNS0095611	Silvery flower (tetraploid) 2	26.926
	CNS0095612	Silvery flower (tetraploid) 3	25.873
	CNS0095613	Golden flower (tetraploid) 1	4.519
	CNS0095614	Golden flower (tetraploid) 2	17.736
	CNS0095615	Golden flower (tetraploid) 3	20.694
CRA001975	CRR073297	Stem 1	14.519
	CRR073298	Stem 2	14.184
	CRR073299	Stem 3	9.459
	CRR073300	Leaf 1	12.588
	CRR073301	Leaf 2	10.145
	CRR073302	Leaf 3	11.608
	CRR073303	Juvenile bud 1	5.491
	CRR073304	Juvenile bud 2	4.680
	CRR073305	Juvenile bud 3	8.723
	CRR073306	Third green 1	6.033
	CRR073307	Third green 2	2.435
	CRR073308	Third green 3	6.249
	CRR073309	Second white 1	2.975
	CRR073310	Second white 2	6.344
	CRR073311	Second white 3	8.321
	CRR073312	Silver flowering 1	5.314
	CRR073313	Silver flowering 2	5.294
	CRR073314	Silver flowering 3	4.800
	CRR073315	Gold flowering 1	1.618
	CRR073316	Gold flowering 2	7.158
	CRR073317	Gold flowering 3	3.133
	CRR073318	Tawny withering 1	4.995
	CRR073319	Tawny withering 2	3.625
	CRR073320	Tawny withering 3	2.429