Detail information of GWHGAAZE018694


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009599814.10PREDICTED: dynamin-related protein 3A-like [Nicotiana tomentosiformis]
Swissprottr|Q8S944|DRP3A_ARATH0Dynamin-related protein 3A
trEMBLtr|A0A061E0U7|A0A061E0U7_THECC0Dynamin-related protein 3A isoform 1 {ECO:0000313|EMBL:EOX98644.1}
TAIR10AT4G33650.10dynamin-related protein 3A

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene2296523822979411-
GWHAAZE00000005mRNA2296523822979411-
GWHAAZE00000005exon2297903422979411-
GWHAAZE00000005exon2297784722978145-
GWHAAZE00000005exon2297769422977733-
GWHAAZE00000005exon2297750922977610-
GWHAAZE00000005exon2297629922976367-
GWHAAZE00000005exon2297615022976209-
GWHAAZE00000005exon2297574322975856-
GWHAAZE00000005exon2297426922974317-
GWHAAZE00000005exon2297299422973103-
GWHAAZE00000005exon2297124222971334-
GWHAAZE00000005exon2297100022971092-
GWHAAZE00000005exon2297077422970911-
GWHAAZE00000005exon2296934222969455-
GWHAAZE00000005exon2296909722969192-
GWHAAZE00000005exon2296886522968907-
GWHAAZE00000005exon2296806222968210-
GWHAAZE00000005exon2296780722967953-
GWHAAZE00000005exon2296609122966143-
GWHAAZE00000005exon2296580322965902-
GWHAAZE00000005exon2296523822965516-
GWHAAZE00000005CDS2297903422979411-
GWHAAZE00000005CDS2297784722978145-
GWHAAZE00000005CDS2297769422977733-
GWHAAZE00000005CDS2297750922977610-
GWHAAZE00000005CDS2297629922976367-
GWHAAZE00000005CDS2297615022976209-
GWHAAZE00000005CDS2297574322975856-
GWHAAZE00000005CDS2297426922974317-
GWHAAZE00000005CDS2297299422973103-
GWHAAZE00000005CDS2297124222971334-
GWHAAZE00000005CDS2297100022971092-
GWHAAZE00000005CDS2297077422970911-
GWHAAZE00000005CDS2296934222969455-
GWHAAZE00000005CDS2296909722969192-
GWHAAZE00000005CDS2296886522968907-
GWHAAZE00000005CDS2296806222968210-
GWHAAZE00000005CDS2296780722967953-
GWHAAZE00000005CDS2296609122966143-
GWHAAZE00000005CDS2296580322965902-
GWHAAZE00000005CDS2296523822965516-
Transcript Sequence

Network for GWHGAAZE018694

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00350.24Dynamin_N512231.60E-49
PF01031.21Dynamin_M2505347.50E-103
PF02212.19GED6647532.10E-26
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K17065DNM1L TNF signaling pathway map04668
Mitophagy - yeastmap04139
Apoptosis - flymap04214
Necroptosismap04217
NOD-like receptor signaling pathwaymap04621

Gene Ontology

GO term OntologyName
GO:0003924molecular_functionGTPase activity
GO:0005525molecular_functionGTP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf30.843
SRR3591706second leaf26.982
SRR3591707mature leaf32.573
SRR3591708Shoot apex33.627
SRR3591709Stem27.400
SRR3591710White floral bud30.229
SRR3591711White flower39.130
SRR3591712Green floral bud29.912
SRR3591713Yellow flower39.090
SRP173429 SRR8316895Juvenile bud stage 18.739
SRR8316896Juvenile bud stage 25.358
SRR8316897Juvenile bud stage 13.774
SRR8316894Third green stage 9.573
SRR8316900Third green stage 27.904
SRR8316901Third green stage 26.126
SRR8316898Complete white stage 12.959
SRR8316899Complete white stage 36.102
SRR8316903Complete white stage 25.027
SRR8316902Silver flowering stage17.560
SRR8316904Silver flowering stage22.282
SRR8316905Silver flowering stage8.353
SRR8316906Gold flowering stage 31.631
SRR8316907Gold flowering stage 31.362
SRR8316908Gold flowering stage 30.981
SRP132670SRR6706286Control26.991
SRR6706287Light intensity 50%27.403
SRR6706288Light intensity 20%29.626
CNP0000432CNS0095592Slightly white alabastrum(diploid) 117.787
CNS0095593Slightly white alabastrum(diploid) 217.750
CNS0095594Slightly white alabastrum(diploid) 320.135
CNS0095595Whole white alabastrum(diploid) 214.557
CNS0095596Whole white alabastrum(diploid) 313.212
CNS0095597Whole white alabastrum(diploid) 415.205
CNS0095598Silvery flower (diploied) 121.969
CNS0095599Silvery flower (diploied) 221.429
CNS0095600Silvery flower (diploied) 332.824
CNS0095601Golden flower (diploid) 119.281
CNS0095602Golden flower (diploid) 232.867
CNS0095603Golden flower (diploid) 332.938
CNS0095604Slightly white alabastrum(tetraploid) 118.615
CNS0095605Slightly white alabastrum(tetraploid) 215.126
CNS0095606Slightly white alabastrum(tetraploid) 333.686
CNS0095607Whole white alabastrum(tetraploid) 113.551
CNS0095608Whole white alabastrum(tetraploid) 211.392
CNS0095609Whole white alabastrum(tetraploid) 325.070
CNS0095610Silvery flower (tetraploid) 137.863
CNS0095611Silvery flower (tetraploid) 234.004
CNS0095612Silvery flower (tetraploid) 332.499
CNS0095613Golden flower (tetraploid) 124.203
CNS0095614Golden flower (tetraploid) 231.095
CNS0095615Golden flower (tetraploid) 334.035
CRA001975CRR073297Stem 132.310
CRR073298Stem 234.690
CRR073299Stem 326.460
CRR073300Leaf 132.603
CRR073301Leaf 228.896
CRR073302Leaf 317.997
CRR073303Juvenile bud 122.929
CRR073304Juvenile bud 220.205
CRR073305Juvenile bud 329.292
CRR073306Third green 112.604
CRR073307Third green 211.973
CRR073308Third green 313.757
CRR073309Second white 115.505
CRR073310Second white 219.602
CRR073311Second white 320.804
CRR073312Silver flowering 117.965
CRR073313Silver flowering 218.579
CRR073314Silver flowering 315.590
CRR073315Gold flowering 119.861
CRR073316Gold flowering 233.435
CRR073317Gold flowering 322.088
CRR073318Tawny withering 120.151
CRR073319Tawny withering 222.311
CRR073320Tawny withering 323.603