Detail information of GWHGAAZE018650


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAES63607.24.33967E-72CAP, cysteine-rich secretory protein, antigen 5, partial [Medicago truncatula]
Swissprottr|P11670|PRB1_TOBAC6E-64Basic form of pathogenesis-related protein 1 (Precursor)
trEMBLtr|G7IFC9|G7IFC9_MEDTR2E-72CAP, cysteine-rich secretory protein, antigen 5 {ECO:0000313|EMBL:AES63607.2} (Fragment)
TAIR10AT4G33720.12E-44CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene2230522022305714+
GWHAAZE00000005mRNA2230522022305714+
GWHAAZE00000005exon2230522022305714+
GWHAAZE00000005CDS2230522022305714+
Transcript Sequence

Network for GWHGAAZE018650

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00188.27CAP351525.20E-20
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13449PR1 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075
Plant-pathogen interactionmap04626

Gene Ontology

GO term OntologyName
GO:0005576cellular_componentextracellular region

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.163
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.027
SRR3591709Stem0.682
SRR3591710White floral bud1.174
SRR3591711White flower0.914
SRR3591712Green floral bud3.500
SRR3591713Yellow flower0.161
SRP173429 SRR8316895Juvenile bud stage 1.180
SRR8316896Juvenile bud stage 1.853
SRR8316897Juvenile bud stage 1.848
SRR8316894Third green stage 0.651
SRR8316900Third green stage 3.209
SRR8316901Third green stage 2.632
SRR8316898Complete white stage 0.309
SRR8316899Complete white stage 2.449
SRR8316903Complete white stage 1.253
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.123
SRR8316905Silver flowering stage0.129
SRR8316906Gold flowering stage 0.409
SRR8316907Gold flowering stage 0.324
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control6.309
SRR6706287Light intensity 50%6.089
SRR6706288Light intensity 20%6.224
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.864
CNS0095593Slightly white alabastrum(diploid) 22.309
CNS0095594Slightly white alabastrum(diploid) 31.750
CNS0095595Whole white alabastrum(diploid) 26.345
CNS0095596Whole white alabastrum(diploid) 36.391
CNS0095597Whole white alabastrum(diploid) 46.447
CNS0095598Silvery flower (diploied) 11.207
CNS0095599Silvery flower (diploied) 21.310
CNS0095600Silvery flower (diploied) 31.788
CNS0095601Golden flower (diploid) 13.061
CNS0095602Golden flower (diploid) 21.374
CNS0095603Golden flower (diploid) 32.280
CNS0095604Slightly white alabastrum(tetraploid) 11.264
CNS0095605Slightly white alabastrum(tetraploid) 21.729
CNS0095606Slightly white alabastrum(tetraploid) 33.720
CNS0095607Whole white alabastrum(tetraploid) 12.268
CNS0095608Whole white alabastrum(tetraploid) 24.025
CNS0095609Whole white alabastrum(tetraploid) 31.156
CNS0095610Silvery flower (tetraploid) 11.233
CNS0095611Silvery flower (tetraploid) 20.933
CNS0095612Silvery flower (tetraploid) 30.095
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.337
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.619
CRR073298Stem 22.250
CRR073299Stem 32.218
CRR073300Leaf 13.589
CRR073301Leaf 22.012
CRR073302Leaf 37.958
CRR073303Juvenile bud 110.121
CRR073304Juvenile bud 28.847
CRR073305Juvenile bud 37.156
CRR073306Third green 10.445
CRR073307Third green 21.796
CRR073308Third green 31.882
CRR073309Second white 10.000
CRR073310Second white 20.601
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.212
CRR073318Tawny withering 122.068
CRR073319Tawny withering 23.388
CRR073320Tawny withering 313.662