Detail information of GWHGAAZE018430


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010105351.13.77916E-63Ocs element-binding factor 1 [Morus notabilis]
Swissprottr|P24068|OCS1_MAIZE6E-24Ocs element-binding factor 1
trEMBLtr|W9SFP2|W9SFP2_9ROSA1E-63Ocs element-binding factor 1 {ECO:0000313|EMBL:EXC04411.1}
TAIR10AT4G34590.13E-37G-box binding factor 6

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1943444919434907-
GWHAAZE00000005mRNA1943444919434907-
GWHAAZE00000005exon1943444919434907-
GWHAAZE00000005CDS1943444919434907-
Transcript Sequence

Network for GWHGAAZE018430

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00170.22bZIP_129842.50E-10
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybZIP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355biological_processregulation of transcription, DNA-templated
GO:0003700molecular_functionDNA-binding transcription factor activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf110.945
SRR3591706second leaf198.307
SRR3591707mature leaf335.164
SRR3591708Shoot apex148.280
SRR3591709Stem611.034
SRR3591710White floral bud165.347
SRR3591711White flower85.527
SRR3591712Green floral bud390.293
SRR3591713Yellow flower19.723
SRP173429 SRR8316895Juvenile bud stage 152.319
SRR8316896Juvenile bud stage 219.536
SRR8316897Juvenile bud stage 71.731
SRR8316894Third green stage 99.307
SRR8316900Third green stage 345.808
SRR8316901Third green stage 372.068
SRR8316898Complete white stage 39.009
SRR8316899Complete white stage 493.158
SRR8316903Complete white stage 85.123
SRR8316902Silver flowering stage17.633
SRR8316904Silver flowering stage12.015
SRR8316905Silver flowering stage5.308
SRR8316906Gold flowering stage 12.740
SRR8316907Gold flowering stage 13.718
SRR8316908Gold flowering stage 9.969
SRP132670SRR6706286Control276.107
SRR6706287Light intensity 50%315.708
SRR6706288Light intensity 20%344.248
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1213.141
CNS0095593Slightly white alabastrum(diploid) 2313.182
CNS0095594Slightly white alabastrum(diploid) 3268.608
CNS0095595Whole white alabastrum(diploid) 2220.782
CNS0095596Whole white alabastrum(diploid) 3176.480
CNS0095597Whole white alabastrum(diploid) 4213.236
CNS0095598Silvery flower (diploied) 1153.009
CNS0095599Silvery flower (diploied) 291.720
CNS0095600Silvery flower (diploied) 356.858
CNS0095601Golden flower (diploid) 1107.454
CNS0095602Golden flower (diploid) 268.569
CNS0095603Golden flower (diploid) 360.747
CNS0095604Slightly white alabastrum(tetraploid) 1307.822
CNS0095605Slightly white alabastrum(tetraploid) 2257.315
CNS0095606Slightly white alabastrum(tetraploid) 3455.611
CNS0095607Whole white alabastrum(tetraploid) 1211.961
CNS0095608Whole white alabastrum(tetraploid) 2198.281
CNS0095609Whole white alabastrum(tetraploid) 3248.358
CNS0095610Silvery flower (tetraploid) 139.998
CNS0095611Silvery flower (tetraploid) 249.435
CNS0095612Silvery flower (tetraploid) 331.935
CNS0095613Golden flower (tetraploid) 17.236
CNS0095614Golden flower (tetraploid) 239.378
CNS0095615Golden flower (tetraploid) 33.549
CRA001975CRR073297Stem 1216.045
CRR073298Stem 2213.958
CRR073299Stem 3235.642
CRR073300Leaf 1364.429
CRR073301Leaf 2384.804
CRR073302Leaf 3319.415
CRR073303Juvenile bud 1319.263
CRR073304Juvenile bud 2336.734
CRR073305Juvenile bud 3399.051
CRR073306Third green 134.178
CRR073307Third green 247.922
CRR073308Third green 344.881
CRR073309Second white 19.217
CRR073310Second white 28.101
CRR073311Second white 34.341
CRR073312Silver flowering 11.651
CRR073313Silver flowering 26.341
CRR073314Silver flowering 32.334
CRR073315Gold flowering 1283.696
CRR073316Gold flowering 2228.629
CRR073317Gold flowering 3238.533
CRR073318Tawny withering 1403.327
CRR073319Tawny withering 2233.922
CRR073320Tawny withering 3395.612