Gene detail

Detail information of GWHGAAZE018421

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007042091.1	0	BEL1-like homeodomain protein 6 isoform 1 [Theobroma cacao]
Swissprot	tr\|O65685\|BLH6_ARATH	4E-94	BEL1-like homeodomain protein 6
trEMBL	tr\|A0A061DZU5\|A0A061DZU5_THECC	0	BEL1-like homeodomain protein 6 isoform 1 {ECO:0000313\|EMBL:EOX97922.1}
TAIR10	AT2G16400.1	7E-78	BEL1-like homeodomain 7

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000005	gene	19324512	19327257	+
GWHAAZE00000005	mRNA	19324512	19327257	+
GWHAAZE00000005	exon	19324512	19325393	+
GWHAAZE00000005	exon	19325503	19325787	+
GWHAAZE00000005	exon	19326395	19326526	+
GWHAAZE00000005	exon	19326647	19326778	+
GWHAAZE00000005	exon	19326901	19327257	+
GWHAAZE00000005	CDS	19324512	19325393	+
GWHAAZE00000005	CDS	19325503	19325787	+
GWHAAZE00000005	CDS	19326395	19326526	+
GWHAAZE00000005	CDS	19326647	19326778	+
GWHAAZE00000005	CDS	19326901	19327257	+

Transcript Sequence
>GWHTAAZE018443 ATGGCTACTTATTTCCCAACTTCAAACAATCAAAGAGACACTGCGGCAATGCTTTATTTAAGGGAACCTCTGCCCAATTCTTCTTATCCAGAAACACCCAATCTTTCCACTAATGTGATGATGATGTATATGAATTACCCACCTTCCTCTAGGTCATACACGGATACTTTGTCAGCAGCCAATTCCCGCCAGCAGAACAACTCCATTGACATTCACCCTTTAGGACATTCAAATCCCAATGCTTCACAACAAAGATTTCTATCAAATCTTGAAGAAACACAAATCAGGGATCAAGATTTTAATGCCTGGAGGGATAATAGCAGAAATGATATGTTATTGATGCAGCCGATGGGTGAGCTGGGACCCACAAGCATTCTTGAAAATAGTCAGAATTTGCAGGGTCAGGGACTATCACTAAGCCTCAGCCCACAAATACCCTCTGGAATTGAAATCCCATCTCTCCAATACCTGAATCCTAATTCTGGGTTTTCTTCTCTTTTGGGTCCAAATTCCTCAGCTTCAGGCAAGGCTGATGACGGGTCTTTTATAGACAACGAGAATTCCCAGAACAAGCAACCAAGAAATGATGAATGTATGAAATTTGACACTTCTCAATTTGGTTTGTCGGGTATTTCAAGAAACATACCCGGTTCAAAATACCTAAAGGCGGTCCAACAATTGCTCAATGAAGTTGTTAATGTACATAAAGCTAAGAAGCAACAGGAATCTAAGAAAGAATTAAGAAAGGACTCGAAAGAAAGTGAAAACTCGGTACCTTCAAACCTGCAAGAGCCTACAAACAACTCCCCAGCCGATCTTTCAGCAGCTGAAAAACAAGATTTACAGAACAATATGACAAAGCTTTTGGCCATGTTGGATGAGGTTGATAGAAGGTACAGACAGTACTATCATCAAATGCAGATTGTGATATCTTCATTCGACGCTATTGTGGGATGTGGGTCCGCTATGCCGTACACAGCGCTTGCTCTCCAAACAATTTCTCGTCACTTCCGTTGCTTACGTGATGCAATCAACAGTCAGATTCACTCAACTCAACAAAACCTCGGAGGGGAGCAAGATGGTTCGGCCAATATCAAGGGGTGGGTATATCCCGTCTCCGTTATGTGGACCAGCAGCTCAGACAGCAGAGAGCCCTTCATCATCTCGGCTCTTAACATGATCCCTTTCTCAATATGTTTGAATAGTTGGTTTGATCGGTTCATTTCTTGTGTTTGTAGCTATCCGAAAGATTCTGACAAGATCTTGCTTGCAAGACAAACTGGCTTGACTAGAAGTCAGGTTTCAAACTGGTTTATAAACGCGCGAGTGCGTCTCTGGAAGCCCATGGTTGAAGAAATGTACAAAGAAGAGGCTGGTGATGCAGAGATGGACTCTAATTCTTCATCGGAAGTTTCCCCAAACCTACAAATGGAAATGATGGGACCCGGTACATATTTAAGCTTCCAAAATGTGACGCCTGTAGAAACTAGATCTCATTACGAGACAATTGTTCAGTCAAACGAAAGTGGAGAGAGGATTATTACTGACGCTGATGCTGCATACCACATGTCGGAGTTGGCGAGATTTGGAAATGGAAGCGGTGTGTCGCTGACGTTAGGGTTACAGCACTGTGAGGACAGTAGTAGCGTGCCCATGTCTCTTGGCGGTCATCACGGTTATGTCGCTGTGAGAGGAGACGATGTTTATAGTGCACCAGCAACGTCTTCAGTGGGGACAAATGGTGCGGATTTTGATTGCATGGATACTGGGAACGGGCAGAAATTGTGA

Network for GWHGAAZE018421

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07526.12	POX	215	344	3.50E-49
PF05920.12	Homeobox_KN	414	444	1.40E-11

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	HB-BELL

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006355	biological_process	regulation of transcription, DNA-templated
GO:0003677	molecular_function	DNA binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	22.183
	SRR3591706	second leaf	1.585
	SRR3591707	mature leaf	0.980
	SRR3591708	Shoot apex	1.679
	SRR3591709	Stem	38.729
	SRR3591710	White floral bud	2.777
	SRR3591711	White flower	10.199
	SRR3591712	Green floral bud	2.003
	SRR3591713	Yellow flower	23.607
SRP173429	SRR8316895	Juvenile bud stage	11.726
	SRR8316896	Juvenile bud stage	7.717
	SRR8316897	Juvenile bud stage	2.568
	SRR8316894	Third green stage	1.156
	SRR8316900	Third green stage	2.286
	SRR8316901	Third green stage	2.518
	SRR8316898	Complete white stage	0.807
	SRR8316899	Complete white stage	5.496
	SRR8316903	Complete white stage	1.582
	SRR8316902	Silver flowering stage	2.205
	SRR8316904	Silver flowering stage	3.420
	SRR8316905	Silver flowering stage	0.874
	SRR8316906	Gold flowering stage	7.222
	SRR8316907	Gold flowering stage	8.040
	SRR8316908	Gold flowering stage	9.436
SRP132670	SRR6706286	Control	2.589
	SRR6706287	Light intensity 50%	2.595
	SRR6706288	Light intensity 20%	2.462
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.550
	CNS0095593	Slightly white alabastrum(diploid) 2	1.549
	CNS0095594	Slightly white alabastrum(diploid) 3	3.463
	CNS0095595	Whole white alabastrum(diploid) 2	0.681
	CNS0095596	Whole white alabastrum(diploid) 3	1.144
	CNS0095597	Whole white alabastrum(diploid) 4	1.027
	CNS0095598	Silvery flower (diploied) 1	1.590
	CNS0095599	Silvery flower (diploied) 2	1.414
	CNS0095600	Silvery flower (diploied) 3	2.791
	CNS0095601	Golden flower (diploid) 1	1.647
	CNS0095602	Golden flower (diploid) 2	3.744
	CNS0095603	Golden flower (diploid) 3	3.941
	CNS0095604	Slightly white alabastrum(tetraploid) 1	1.696
	CNS0095605	Slightly white alabastrum(tetraploid) 2	1.852
	CNS0095606	Slightly white alabastrum(tetraploid) 3	2.591
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.400
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.674
	CNS0095609	Whole white alabastrum(tetraploid) 3	1.254
	CNS0095610	Silvery flower (tetraploid) 1	6.607
	CNS0095611	Silvery flower (tetraploid) 2	3.697
	CNS0095612	Silvery flower (tetraploid) 3	4.733
	CNS0095613	Golden flower (tetraploid) 1	12.520
	CNS0095614	Golden flower (tetraploid) 2	16.084
	CNS0095615	Golden flower (tetraploid) 3	10.351
CRA001975	CRR073297	Stem 1	30.912
	CRR073298	Stem 2	13.490
	CRR073299	Stem 3	14.847
	CRR073300	Leaf 1	1.383
	CRR073301	Leaf 2	1.744
	CRR073302	Leaf 3	1.346
	CRR073303	Juvenile bud 1	1.634
	CRR073304	Juvenile bud 2	1.421
	CRR073305	Juvenile bud 3	2.540
	CRR073306	Third green 1	2.308
	CRR073307	Third green 2	2.015
	CRR073308	Third green 3	2.237
	CRR073309	Second white 1	6.549
	CRR073310	Second white 2	6.977
	CRR073311	Second white 3	8.416
	CRR073312	Silver flowering 1	8.954
	CRR073313	Silver flowering 2	8.724
	CRR073314	Silver flowering 3	9.622
	CRR073315	Gold flowering 1	0.144
	CRR073316	Gold flowering 2	0.285
	CRR073317	Gold flowering 3	0.091
	CRR073318	Tawny withering 1	17.725
	CRR073319	Tawny withering 2	7.975
	CRR073320	Tawny withering 3	22.468