Detail information of GWHGAAZE018385


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007041987.11.4917E-44SAUR-like auxin-responsive protein family [Theobroma cacao]
Swissprottr|P32295|ARG7_VIGRR2E-35Indole-3-acetic acid-induced protein ARG7
trEMBLtr|A0A061E6C9|A0A061E6C9_THECC6E-45SAUR-like auxin-responsive protein family {ECO:0000313|EMBL:EOX97818.1}
TAIR10AT4G38840.17E-31SAUR-like auxin-responsive protein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1875394318754230+
GWHAAZE00000005mRNA1875394318754230+
GWHAAZE00000005exon1875394318754230+
GWHAAZE00000005CDS1875394318754230+
Transcript Sequence

Network for GWHGAAZE018385

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02519.15Auxin_inducible16931.00E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14488SAUR Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0009733biological_processresponse to auxin

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf12.750
SRR3591706second leaf10.712
SRR3591707mature leaf1.637
SRR3591708Shoot apex4.550
SRR3591709Stem3.650
SRR3591710White floral bud16.647
SRR3591711White flower3.418
SRR3591712Green floral bud7.916
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 1.008
SRR8316896Juvenile bud stage 9.321
SRR8316897Juvenile bud stage 0.133
SRR8316894Third green stage 2.432
SRR8316900Third green stage 13.465
SRR8316901Third green stage 13.482
SRR8316898Complete white stage 40.492
SRR8316899Complete white stage 18.129
SRR8316903Complete white stage 58.906
SRR8316902Silver flowering stage11.088
SRR8316904Silver flowering stage17.632
SRR8316905Silver flowering stage10.895
SRR8316906Gold flowering stage 18.776
SRR8316907Gold flowering stage 16.617
SRR8316908Gold flowering stage 5.089
SRP132670SRR6706286Control9.365
SRR6706287Light intensity 50%11.054
SRR6706288Light intensity 20%6.861
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.270
CNS0095593Slightly white alabastrum(diploid) 26.457
CNS0095594Slightly white alabastrum(diploid) 31.942
CNS0095595Whole white alabastrum(diploid) 29.342
CNS0095596Whole white alabastrum(diploid) 39.547
CNS0095597Whole white alabastrum(diploid) 47.934
CNS0095598Silvery flower (diploied) 13.627
CNS0095599Silvery flower (diploied) 212.118
CNS0095600Silvery flower (diploied) 316.100
CNS0095601Golden flower (diploid) 12.294
CNS0095602Golden flower (diploid) 23.819
CNS0095603Golden flower (diploid) 33.736
CNS0095604Slightly white alabastrum(tetraploid) 13.839
CNS0095605Slightly white alabastrum(tetraploid) 24.339
CNS0095606Slightly white alabastrum(tetraploid) 38.702
CNS0095607Whole white alabastrum(tetraploid) 15.765
CNS0095608Whole white alabastrum(tetraploid) 28.171
CNS0095609Whole white alabastrum(tetraploid) 35.526
CNS0095610Silvery flower (tetraploid) 14.165
CNS0095611Silvery flower (tetraploid) 210.497
CNS0095612Silvery flower (tetraploid) 30.961
CNS0095613Golden flower (tetraploid) 11.885
CNS0095614Golden flower (tetraploid) 20.304
CNS0095615Golden flower (tetraploid) 35.766
CRA001975CRR073297Stem 14.565
CRR073298Stem 22.336
CRR073299Stem 31.503
CRR073300Leaf 10.671
CRR073301Leaf 21.542
CRR073302Leaf 30.606
CRR073303Juvenile bud 12.654
CRR073304Juvenile bud 20.654
CRR073305Juvenile bud 32.827
CRR073306Third green 15.210
CRR073307Third green 28.783
CRR073308Third green 36.446
CRR073309Second white 12.480
CRR073310Second white 26.314
CRR073311Second white 30.627
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.397
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.752
CRR073316Gold flowering 21.781
CRR073317Gold flowering 32.847
CRR073318Tawny withering 10.160
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000