Detail information of GWHGAAZE018333


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrACH87168.10senescence-related protein [Camellia sinensis]
trEMBLtr|B5TV63|B5TV63_CAMSI0Senescence-related protein {ECO:0000313|EMBL:ACH87168.1}
TAIR10AT2G17840.11E-132Senescence/dehydration-associated protein-related

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1812096818123742-
GWHAAZE00000005mRNA1812096818123742-
GWHAAZE00000005exon1812096818121145-
GWHAAZE00000005exon1812143618121520-
GWHAAZE00000005exon1812183818122004-
GWHAAZE00000005exon1812285918123742-
GWHAAZE00000005CDS1812285918123742-
GWHAAZE00000005CDS1812183818122004-
GWHAAZE00000005CDS1812143618121520-
GWHAAZE00000005CDS1812096818121145-
Transcript Sequence

Network for GWHGAAZE018333

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06911.13Senescence2364111.70E-42
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K19366SPG20 Endocytosis map04144

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf239.346
SRR3591706second leaf74.888
SRR3591707mature leaf72.563
SRR3591708Shoot apex86.834
SRR3591709Stem225.894
SRR3591710White floral bud74.108
SRR3591711White flower100.311
SRR3591712Green floral bud50.601
SRR3591713Yellow flower47.231
SRP173429 SRR8316895Juvenile bud stage 178.425
SRR8316896Juvenile bud stage 188.487
SRR8316897Juvenile bud stage 117.141
SRR8316894Third green stage 28.157
SRR8316900Third green stage 57.306
SRR8316901Third green stage 108.682
SRR8316898Complete white stage 15.968
SRR8316899Complete white stage 172.482
SRR8316903Complete white stage 25.976
SRR8316902Silver flowering stage19.946
SRR8316904Silver flowering stage19.679
SRR8316905Silver flowering stage10.929
SRR8316906Gold flowering stage 32.016
SRR8316907Gold flowering stage 23.613
SRR8316908Gold flowering stage 22.931
SRP132670SRR6706286Control64.758
SRR6706287Light intensity 50%62.218
SRR6706288Light intensity 20%66.272
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1117.543
CNS0095593Slightly white alabastrum(diploid) 2167.218
CNS0095594Slightly white alabastrum(diploid) 3144.023
CNS0095595Whole white alabastrum(diploid) 2142.836
CNS0095596Whole white alabastrum(diploid) 329.048
CNS0095597Whole white alabastrum(diploid) 484.409
CNS0095598Silvery flower (diploied) 1235.531
CNS0095599Silvery flower (diploied) 2250.069
CNS0095600Silvery flower (diploied) 3110.411
CNS0095601Golden flower (diploid) 1245.393
CNS0095602Golden flower (diploid) 2204.284
CNS0095603Golden flower (diploid) 3196.867
CNS0095604Slightly white alabastrum(tetraploid) 116.646
CNS0095605Slightly white alabastrum(tetraploid) 213.969
CNS0095606Slightly white alabastrum(tetraploid) 338.604
CNS0095607Whole white alabastrum(tetraploid) 112.864
CNS0095608Whole white alabastrum(tetraploid) 29.459
CNS0095609Whole white alabastrum(tetraploid) 326.577
CNS0095610Silvery flower (tetraploid) 159.799
CNS0095611Silvery flower (tetraploid) 254.297
CNS0095612Silvery flower (tetraploid) 318.017
CNS0095613Golden flower (tetraploid) 113.900
CNS0095614Golden flower (tetraploid) 230.068
CNS0095615Golden flower (tetraploid) 310.338
CRA001975CRR073297Stem 198.489
CRR073298Stem 294.095
CRR073299Stem 371.108
CRR073300Leaf 1124.960
CRR073301Leaf 2164.618
CRR073302Leaf 358.869
CRR073303Juvenile bud 197.500
CRR073304Juvenile bud 246.100
CRR073305Juvenile bud 398.901
CRR073306Third green 157.453
CRR073307Third green 255.000
CRR073308Third green 340.418
CRR073309Second white 1130.608
CRR073310Second white 298.939
CRR073311Second white 388.672
CRR073312Silver flowering 1183.607
CRR073313Silver flowering 2182.573
CRR073314Silver flowering 3170.084
CRR073315Gold flowering 182.499
CRR073316Gold flowering 2125.509
CRR073317Gold flowering 359.341
CRR073318Tawny withering 1106.010
CRR073319Tawny withering 2147.948
CRR073320Tawny withering 383.825