Detail information of GWHGAAZE018254


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007043083.10Calmodulin-domain protein kinase 5 isoform 1 [Theobroma cacao]
Swissprottr|A5A7I7|CDPK4_SOLTU0Calcium-dependent protein kinase 4
trEMBLtr|A0A061E1R7|A0A061E1R7_THECC0Calmodulin-domain protein kinase 5 isoform 1 {ECO:0000313|EMBL:EOX98915.1}
TAIR10AT2G17290.10Calcium-dependent protein kinase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1711214617115865-
GWHAAZE00000005mRNA1711214617115865-
GWHAAZE00000005exon1711214617112265-
GWHAAZE00000005exon1711240817112617-
GWHAAZE00000005exon1711306617113233-
GWHAAZE00000005exon1711362517113740-
GWHAAZE00000005exon1711455017114702-
GWHAAZE00000005exon1711478217114925-
GWHAAZE00000005exon1711509717115865-
GWHAAZE00000005CDS1711509717115865-
GWHAAZE00000005CDS1711478217114925-
GWHAAZE00000005CDS1711455017114702-
GWHAAZE00000005CDS1711362517113740-
GWHAAZE00000005CDS1711306617113233-
GWHAAZE00000005CDS1711240817112617-
GWHAAZE00000005CDS1711214617112265-
Transcript Sequence

Network for GWHGAAZE018254

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase1023607.40E-72
PF13499.7EF-hand_74084687.30E-12
PF13499.7EF-hand_74775343.80E-07
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CDPK

KEGG pathway

KO Enzyme pathway mapID
K13412CPK Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0005509molecular_functioncalcium ion binding
GO:0005524molecular_functionATP binding
GO:0004672molecular_functionprotein kinase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf49.553
SRR3591706second leaf31.658
SRR3591707mature leaf40.674
SRR3591708Shoot apex24.977
SRR3591709Stem37.571
SRR3591710White floral bud74.844
SRR3591711White flower67.010
SRR3591712Green floral bud81.185
SRR3591713Yellow flower67.624
SRP173429 SRR8316895Juvenile bud stage 24.093
SRR8316896Juvenile bud stage 39.006
SRR8316897Juvenile bud stage 19.646
SRR8316894Third green stage 21.293
SRR8316900Third green stage 75.726
SRR8316901Third green stage 72.650
SRR8316898Complete white stage 27.454
SRR8316899Complete white stage 90.690
SRR8316903Complete white stage 42.299
SRR8316902Silver flowering stage26.638
SRR8316904Silver flowering stage37.934
SRR8316905Silver flowering stage17.157
SRR8316906Gold flowering stage 70.722
SRR8316907Gold flowering stage 60.901
SRR8316908Gold flowering stage 78.100
SRP132670SRR6706286Control60.686
SRR6706287Light intensity 50%62.993
SRR6706288Light intensity 20%60.146
CNP0000432CNS0095592Slightly white alabastrum(diploid) 139.482
CNS0095593Slightly white alabastrum(diploid) 241.389
CNS0095594Slightly white alabastrum(diploid) 334.914
CNS0095595Whole white alabastrum(diploid) 274.080
CNS0095596Whole white alabastrum(diploid) 375.308
CNS0095597Whole white alabastrum(diploid) 492.652
CNS0095598Silvery flower (diploied) 132.773
CNS0095599Silvery flower (diploied) 229.435
CNS0095600Silvery flower (diploied) 354.453
CNS0095601Golden flower (diploid) 126.059
CNS0095602Golden flower (diploid) 255.602
CNS0095603Golden flower (diploid) 355.925
CNS0095604Slightly white alabastrum(tetraploid) 160.765
CNS0095605Slightly white alabastrum(tetraploid) 255.729
CNS0095606Slightly white alabastrum(tetraploid) 352.115
CNS0095607Whole white alabastrum(tetraploid) 190.147
CNS0095608Whole white alabastrum(tetraploid) 2100.913
CNS0095609Whole white alabastrum(tetraploid) 376.269
CNS0095610Silvery flower (tetraploid) 150.755
CNS0095611Silvery flower (tetraploid) 239.190
CNS0095612Silvery flower (tetraploid) 348.505
CNS0095613Golden flower (tetraploid) 127.100
CNS0095614Golden flower (tetraploid) 242.272
CNS0095615Golden flower (tetraploid) 339.422
CRA001975CRR073297Stem 136.096
CRR073298Stem 235.691
CRR073299Stem 323.772
CRR073300Leaf 164.459
CRR073301Leaf 248.955
CRR073302Leaf 333.600
CRR073303Juvenile bud 143.830
CRR073304Juvenile bud 242.995
CRR073305Juvenile bud 340.098
CRR073306Third green 135.711
CRR073307Third green 233.410
CRR073308Third green 333.984
CRR073309Second white 126.673
CRR073310Second white 234.180
CRR073311Second white 337.749
CRR073312Silver flowering 135.643
CRR073313Silver flowering 234.054
CRR073314Silver flowering 340.923
CRR073315Gold flowering 114.527
CRR073316Gold flowering 220.541
CRR073317Gold flowering 39.040
CRR073318Tawny withering 125.922
CRR073319Tawny withering 221.295
CRR073320Tawny withering 323.997