Gene detail

Detail information of GWHGAAZE018198

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	AEY85028.1	0	putative ATP-binding protein [Camellia sinensis]
Swissprot	tr\|P51567\|AFC2_ARATH	7E-44	Serine/threonine-protein kinase AFC2
trEMBL	tr\|H6UJ36\|H6UJ36_CAMSI	0	Putative ATP-binding protein {ECO:0000313\|EMBL:AEY85028.1}
TAIR10	AT1G73450.1	0	Protein kinase superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000005	gene	16491872	16501510	+
GWHAAZE00000005	mRNA	16491872	16501510	+
GWHAAZE00000005	exon	16491872	16492007	+
GWHAAZE00000005	exon	16492584	16493902	+
GWHAAZE00000005	exon	16495820	16497095	+
GWHAAZE00000005	exon	16497976	16498027	+
GWHAAZE00000005	exon	16498270	16498566	+
GWHAAZE00000005	exon	16499576	16499683	+
GWHAAZE00000005	exon	16499789	16500052	+
GWHAAZE00000005	exon	16500350	16500493	+
GWHAAZE00000005	exon	16501322	16501510	+
GWHAAZE00000005	five_prime_UTR	16491872	16492007	+
GWHAAZE00000005	five_prime_UTR	16492584	16492635	+
GWHAAZE00000005	CDS	16492636	16493902	+
GWHAAZE00000005	CDS	16495820	16497095	+
GWHAAZE00000005	CDS	16497976	16498027	+
GWHAAZE00000005	CDS	16498270	16498566	+
GWHAAZE00000005	CDS	16499576	16499683	+
GWHAAZE00000005	CDS	16499789	16500052	+
GWHAAZE00000005	CDS	16500350	16500493	+
GWHAAZE00000005	CDS	16501322	16501510	+

Transcript Sequence
>GWHTAAZE018220 TATTTTACTGTTTCGAACTAGTGTTACTCTTAAAAAAATCAATATTCATGGGCAATTTGTAGTTTCTTTCTGCTGGCCATGGAATCAATTGCCAACGATACCCATTTTTCTGCAGCGAAAACCTATCCCCCAATCTCTTTATTGGAGTCTTTGCTCTAATACCTGCTTGTAGCATTTTCGAGTTGATAATGGCAGACCCGAGCTCAGCTAACGTCATTCTAGAATTTCTGCGAAGAAATAAATTTTCAAGGGCCGAGGCTGCTTTGCGCAGCGAGCTCAGTAACCGCCCTGAATTGAATGGGTTGTTAAGAAATCTTGCACATGAAGAAAAGGACGCGGGCGAATTGTTGGAAGAGGAGAATGGGACAAAACAGGCTTTGGAAAGCCAAGGGAGAAGTTATTTAACTGGTGATGAAGTTTCTAAGGAGCTTATTGTCAAAGAAATAGAGTGCGGGGCTGGGAGAAACGGATCTGAAAGCAAATGGAAAAATTCTGCCTCTGTTAGTGACCGGAATAAAGCTACTCAACATGTTGGGACGAGTGACAAGAATCCTGCTTTCTCCAATAGTTCAGGGGACACTGTGCTTGATTTGTATTCCTTGAAGTTCAATCCAAGCAATGGGTCCGTTGATCCTTATCAGAGTGATAGGGTCGACAGTGCAAACAACTTGCCAGAGGTAACTTATGCTGGTAAAGCCAGTGACGTAGTCGGAAAAGAAATGAATTTATCCAGTGAGAAGAGAGCATCATGGCTAGACAATACCAGTAAGTCCAGTGTGGAACAAAAGAATCGAAGAGATCAAACTAGTGAACCCACGGAACTAAATCAGCAACGTAAGATTAGTGACGCCTATTCTAAAGATGACTTTGTGGATAACCCATGGTCTAAAAGTGATGATTACAACCGTTCATCATCAGAGCCGTGGAAGGATTGTTCTGTCAAAACTGTATTCCCATTTTCCAAAGGAGATGCGTCAACCAGTTATGACAGTGCCATTGGCAGTGGTGGCAAAAAGGAAGGAAAGAGAAAAGTTGAGAGCAATGAAATCAGGGCAATTAAAGACCAGGTGGATGAAGTCGGAAGAATTTTGTACCTTGGGAAAACTCAAGGAACTATCCAGCCTAATGTTTTCACTGGCTTAGAATTTCCTCATGCATCTGAACATCATCAGGAGGAACTACCTAGGTTGCCGCCTGTTAAACTCAAGTCAGAGGAGAAGCAATTGGATATAAATTGGGAGGAGAAGTTTGAGCGCGATGGACCCGCTGCTAAGATCATCACTGCTGACAGCACCTACCTTATAGGTTCATTTCTGGATGTTCCTATCGGACAAGAAATAAACTATGCAGGTTTGCTTGCTAGTGTGAGAAATATTCTCTTTCATAAACTCCTAGACACATGGGTTATATTTTATTTCAATTTTGCAAACAGATTATCCCGTCAATGCTGTCACCGTGGGAAAAAACCTGGAGGAGGTAGTTGGCTATCAGTAAGCCAGGGCATTGCTGAGGACACATCTGATCTTGTTTCTGGTTTTGCAACGGTTGGCGATGGACTGAGTGAATGTGTTGATTATCCCAACGAGTATTGGGATTCTGACGAATATGACAATGATGATGACGTCGGCTATATGAGACAACCAATCGAAGATGAGACCTGGTTTCTTGCTCATGAAATTGACTACCCAAGTGACAATGAAAAGGGAACAGGACATGGGAGTGTTCACAATCTGCAAGAACGAGGTCCAATCAAAGACGAGGAGGATGATCATTTGTTTGTGGAGGAGGATTCCTACTTATCTGGTGAACGGTATTTTCAGTCGAGAAATGTAGATCCATTGACACCTTCAGATGATCCTATAGGGCTATCATCAACTGAAATTTATGAGACGACCGATGAAAACAATTTGATAGCTCAATATGATGGTAAATTGATGGATGAAGAGGAATTGAATTTGATGCGTGCAGAACCTGTCTGGCAAGGCTTTGTCACTCAGACGAATGAACTCATTATGTTAGGGGATGGGAAAGTTCTGGATGAGCATGGAAGACCTCGGTTGGATGATATTTCTATGGATGATGATCAACATGGTTCAGTTAGATCAATTGGGGTAGGGATTAACAGTTATGCTGCCGATTTTGGTAGAGAGGTTCGGGAAAGTTTGGTTGGAGGCTGTAGTGAGGGGGACTTGGAGTACTTTTATGATCAGGATGACTCAGAGAAGAAATATATTGAGAGATTAAAGAGGGATAAAAAGAGTTCGAGTAAATATAATTCTGATAAGCTTGTATTCGGGAATTCTAAGAGTACATCTACACAGTCAAAAAATCACATAGATGGGGGATTTTCGTACCCCCCACCTAGAGATGGGCAGAGTAAGGGCAGTGCTATTATAAGGGATGAAACTGATGGTAGTTTAAAGGACGAAGAGAATGCTAATAGATCTGCTAATTCTTCCCCCTCAATCCTCTCAAATTATGGCTATGGTGAAAGGGATAATGTGAAGAAAGAGGACGATGAAGAAGTTGGTGGAGCAAGAGAAGAAGATGCAGCAGCAGCAGCAGCGGAGGATGAAGAGGCAGTTGCTGTGCAAGAGCAAGTAAAACAGATAAAGGCTCAGGAGGAAGAGTTCGAAACCTTTGATCTCAAGATTGTGCATCGGAAAAACAGGCATGTCTTTCTTCTTTTTCAATGCATTGGGATCAGGGCTGCTATATTTTTTAGAGTTGAAATGAGGAAAGTGAGTGGGGTTGGGGGCCTTAGTGATGTTTCTTGTATCAGTTTTCTATTTAATTTCAGAACTGGCTTTGAGGAAGACAAAAATTTCCATGTTGTTTTAAATTCAGTCATAGCTGGTCGCTATCACGTTACCGAGTATCTTGGGTCTGCTGCATTCAGCAAAGCTATTCAAGCACACGACCTTCATACTGGAATGGACGTTTGTGTGAAGATTATAAAGAACAACAAAGACTTTTTTGACCAGAGCCTTGATGAGATAAAACTCCTCAAGTTTGTCAACAAGCATGATCCTGGGGATAAGTATCATATTCTGCGGCTGTATGATTACTTTTATTATCGAGAACATTTGTTAATTGTATGTGAACTCCTCAAGGCAAACTTATACGAGTTCCATAAATTCAATAGAGAATCTGGTGGAGAAGTTTACTTCACAATGCCAAGATTGCAGTGTTTGGAGGCACTTCAATTCTTGCATGGTCTTGGCCTCATACATTGTGACTTGAAGCCTGAGAATATTTTGGTGAAAAGCTACAGTAGATGTGAAGTTAAGGTCATCGATCTTGGAAGTAGTTGTTTTGAAACAGACCATCTTTGCTTGTATGTACAATCTAGGTCCTATCGGGCACCAGAGGTTATTTTGGGACTTCCTTATGATAAGAAGATTGATATTTGGTCACTTGGCTGCATCTTGGCAGAACTTTGCACTGGCAATGTTCTCTTCCAAAATGATTCACCTGCCACATTACTTGCTCGGGTAATTGGAATTATTGGTCAAATTGAACAAGACATGCTTGCCAAAGGACGAGACACGTACAAATATTTCACCAAGAATCACATGCTGTATGAACGCAACCAGGACACAGCTAGATTGGAATACCTAATCCCCAAAAGGACATCCTTAAGGCATCGGTTACCAATGGGGGACCAAGGTTTCATAGACTTTGTGGCTCATCTACTTGAAATTAACCCAAAGAAGCGGCCTTCAGCATCAGAAGCGCTGAAACACCCATGGCTATCTTACCCTTATGAACCCATATCTTCTTGA

Network for GWHGAAZE018198

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	892	1189	5.10E-48

Protein Sequence

>GWHPAAZE018209
MADPSSANVILEFLRRNKFSRAEAALRSELSNRPELNGLLRNLAHEEKDAGELLEEENGTKQALESQGRSYLTGDEVSKELIVKEIECGAGRNGSESKWKNSASVSDRNKATQHVGTSDKNPAFSNSSGDTVLDLYSLKFNPSNGSVDPYQSDRVDSANNLPEVTYAGKASDVVGKEMNLSSEKRASWLDNTSKSSVEQKNRRDQTSEPTELNQQRKISDAYSKDDFVDNPWSKSDDYNRSSSEPWKDCSVKTVFPFSKGDASTSYDSAIGSGGKKEGKRKVESNEIRAIKDQVDEVGRILYLGKTQGTIQPNVFTGLEFPHASEHHQEELPRLPPVKLKSEEKQLDINWEEKFERDGPAAKIITADSTYLIGSFLDVPIGQEINYAGLLASVRNILFHKLLDTWVIFYFNFANRLSRQCCHRGKKPGGGSWLSVSQGIAEDTSDLVSGFATVGDGLSECVDYPNEYWDSDEYDNDDDVGYMRQPIEDETWFLAHEIDYPSDNEKGTGHGSVHNLQERGPIKDEEDDHLFVEEDSYLSGERYFQSRNVDPLTPSDDPIGLSSTEIYETTDENNLIAQYDGKLMDEEELNLMRAEPVWQGFVTQTNELIMLGDGKVLDEHGRPRLDDISMDDDQHGSVRSIGVGINSYAADFGREVRESLVGGCSEGDLEYFYDQDDSEKKYIERLKRDKKSSSKYNSDKLVFGNSKSTSTQSKNHIDGGFSYPPPRDGQSKGSAIIRDETDGSLKDEENANRSANSSPSILSNYGYGERDNVKKEDDEEVGGAREEDAAAAAAEDEEAVAVQEQVKQIKAQEEEFETFDLKIVHRKNRHVFLLFQCIGIRAAIFFRVEMRKVSGVGGLSDVSCISFLFNFRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKFVNKHDPGDKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCLYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGQIEQDMLAKGRDTYKYFTKNHMLYERNQDTARLEYLIPKRTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASEALKHPWLSYPYEPISS

Gene family

Gene family	subfamily
Protein Kinases Family	CMGC_DYRK-PRP4

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	19.211
	SRR3591706	second leaf	12.327
	SRR3591707	mature leaf	12.444
	SRR3591708	Shoot apex	17.364
	SRR3591709	Stem	16.363
	SRR3591710	White floral bud	13.114
	SRR3591711	White flower	14.712
	SRR3591712	Green floral bud	17.094
	SRR3591713	Yellow flower	9.899
SRP173429	SRR8316895	Juvenile bud stage	9.484
	SRR8316896	Juvenile bud stage	14.076
	SRR8316897	Juvenile bud stage	5.272
	SRR8316894	Third green stage	6.376
	SRR8316900	Third green stage	15.868
	SRR8316901	Third green stage	14.919
	SRR8316898	Complete white stage	4.114
	SRR8316899	Complete white stage	17.630
	SRR8316903	Complete white stage	9.616
	SRR8316902	Silver flowering stage	4.643
	SRR8316904	Silver flowering stage	7.921
	SRR8316905	Silver flowering stage	3.692
	SRR8316906	Gold flowering stage	11.515
	SRR8316907	Gold flowering stage	10.190
	SRR8316908	Gold flowering stage	11.121
SRP132670	SRR6706286	Control	11.289
	SRR6706287	Light intensity 50%	12.951
	SRR6706288	Light intensity 20%	12.941
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	7.070
	CNS0095593	Slightly white alabastrum(diploid) 2	6.750
	CNS0095594	Slightly white alabastrum(diploid) 3	6.209
	CNS0095595	Whole white alabastrum(diploid) 2	6.874
	CNS0095596	Whole white alabastrum(diploid) 3	5.900
	CNS0095597	Whole white alabastrum(diploid) 4	6.938
	CNS0095598	Silvery flower (diploied) 1	7.947
	CNS0095599	Silvery flower (diploied) 2	6.252
	CNS0095600	Silvery flower (diploied) 3	11.158
	CNS0095601	Golden flower (diploid) 1	6.478
	CNS0095602	Golden flower (diploid) 2	11.114
	CNS0095603	Golden flower (diploid) 3	11.659
	CNS0095604	Slightly white alabastrum(tetraploid) 1	9.014
	CNS0095605	Slightly white alabastrum(tetraploid) 2	6.704
	CNS0095606	Slightly white alabastrum(tetraploid) 3	19.424
	CNS0095607	Whole white alabastrum(tetraploid) 1	6.645
	CNS0095608	Whole white alabastrum(tetraploid) 2	4.913
	CNS0095609	Whole white alabastrum(tetraploid) 3	12.396
	CNS0095610	Silvery flower (tetraploid) 1	12.441
	CNS0095611	Silvery flower (tetraploid) 2	11.896
	CNS0095612	Silvery flower (tetraploid) 3	8.569
	CNS0095613	Golden flower (tetraploid) 1	4.530
	CNS0095614	Golden flower (tetraploid) 2	7.774
	CNS0095615	Golden flower (tetraploid) 3	8.617
CRA001975	CRR073297	Stem 1	15.015
	CRR073298	Stem 2	14.365
	CRR073299	Stem 3	10.068
	CRR073300	Leaf 1	14.819
	CRR073301	Leaf 2	12.245
	CRR073302	Leaf 3	9.173
	CRR073303	Juvenile bud 1	8.619
	CRR073304	Juvenile bud 2	8.623
	CRR073305	Juvenile bud 3	13.543
	CRR073306	Third green 1	2.539
	CRR073307	Third green 2	1.749
	CRR073308	Third green 3	3.572
	CRR073309	Second white 1	2.488
	CRR073310	Second white 2	4.183
	CRR073311	Second white 3	5.117
	CRR073312	Silver flowering 1	3.109
	CRR073313	Silver flowering 2	3.074
	CRR073314	Silver flowering 3	2.389
	CRR073315	Gold flowering 1	4.120
	CRR073316	Gold flowering 2	9.010
	CRR073317	Gold flowering 3	3.192
	CRR073318	Tawny withering 1	8.391
	CRR073319	Tawny withering 2	6.665
	CRR073320	Tawny withering 3	10.853