Gene detail

Detail information of GWHGAAZE018131

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007210883.1	0	hypothetical protein PRUPE_ppa002837mg [Prunus persica]
Swissprot	tr\|Q9LV37\|MPK9_ARATH	0	Mitogen-activated protein kinase 9
trEMBL	tr\|M5WE81\|M5WE81_PRUPE	0	Uncharacterized protein {ECO:0000313\|EMBL:EMJ12082.1}
TAIR10	AT3G18040.1	6E-167	MAP kinase 9

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000005	gene	15544242	15546703	-
GWHAAZE00000005	mRNA	15544242	15546703	-
GWHAAZE00000005	exon	15546541	15546703	-
GWHAAZE00000005	exon	15546333	15546460	-
GWHAAZE00000005	exon	15545868	15546017	-
GWHAAZE00000005	exon	15545446	15545601	-
GWHAAZE00000005	exon	15545167	15545304	-
GWHAAZE00000005	exon	15545010	15545083	-
GWHAAZE00000005	exon	15544749	15544850	-
GWHAAZE00000005	exon	15544242	15544386	-
GWHAAZE00000005	CDS	15546541	15546703	-
GWHAAZE00000005	CDS	15546333	15546460	-
GWHAAZE00000005	CDS	15545868	15546017	-
GWHAAZE00000005	CDS	15545446	15545601	-
GWHAAZE00000005	CDS	15545167	15545304	-
GWHAAZE00000005	CDS	15545010	15545083	-
GWHAAZE00000005	CDS	15544749	15544850	-
GWHAAZE00000005	CDS	15544242	15544386	-

Transcript Sequence
>GWHTAAZE018153 ATGCTTCCTCCTTCTCGAAGAGAGTTTAAAGATATTTATGTTGTTTTTGAATTGATGGAATCTGATCTCCACCAAGTAATTAAAGCAAATGACGATCTTACCCCAGAACATTACCAGTTTTTCTTGTATCAGCTTCTTCGTAGCCTAAAATATATACATTCAGCCAATGTGTTTCATAGAGATTTAAAGCCAAAAAACATCCTTGCTAATGCTGACTGTAAATTGAAGATTTGTGATTTTGGACTTGCTCGTGTATCATTTAATGATGCTCCCTCAGCTATATTCTGGACTTATACTCCTGTGATTGATATTTGGAGCATTGGATGCATCTTTGCAGAAATGCTTAGTGGGAAACCACTGTTTCCTGGGAAAAATGTGGTACACCAATTGGATCTCATGACCGATTTGCTTGTAACTCCATCCCCTGAATCTATTGCAAGGATTCGCAATGAAAAGGCAAAAGGGTATCTATTAAGCATGCGTAAAAAACAGCCAGTTCCATTTTCACAGAAGTTCCCTAATGCAGATCCTTTGGCTCTTCGTCTACTAGAGCGTCTGCTTGCTTTTGATCCTACAGATCGACCATCGGCTGAGGAGTCACTTGCTGATCCTTACTTCCGTGGTTTGGCAAATGTGGAACGTGAACCATCCACTCAACCCATATCAAAACTTGAGTTTGAGTTTGAGAGGAGGAAATTAGCCAAAGATGACGTTAGAGAGTTGATTTATAGAGAGATTTTAGAGTATCACCCCAAGATGCTTGAGGAGTATCTTCGTGGTGGAGAGCAGACTAGCTTCTTGTACCCAAGTGGTGTTGATCGGTTTAAGCGACAGTTTGCCCATCTTGAGGAGCATTATGGTAAAGGAGAAAAAAGTACTCCTCTTCAAAGACAACATGCCTCGTTACCAAGAGAGCGAGTTCCAGGCCCCAAGGATGAAAATGCTGCTGAAAATAACGACGTCGACAAGCAAACTGCAGCTTCTGTTACTACAGCACTTGAAAATCCTCCCGAGGGATCAGAAAATGGACCAAATAAACCAAACTACAGTGCTTGA

Network for GWHGAAZE018131

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	8	206	7.70E-37

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	CMGC_MAPK

KEGG pathway

KO	Enzyme	pathway	mapID
K20538	MPK8	MAPK signaling pathway - plant	map04016

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.172
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	2.272
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	0.137
	SRR3591711	White flower	0.361
	SRR3591712	Green floral bud	0.201
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.105
	SRR8316896	Juvenile bud stage	0.255
	SRR8316897	Juvenile bud stage	0.029
	SRR8316894	Third green stage	0.040
	SRR8316900	Third green stage	0.082
	SRR8316901	Third green stage	0.170
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.455
	SRR8316903	Complete white stage	0.193
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	0.118
	SRR6706287	Light intensity 50%	0.185
	SRR6706288	Light intensity 20%	0.086
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.362
	CNS0095593	Slightly white alabastrum(diploid) 2	0.000
	CNS0095594	Slightly white alabastrum(diploid) 3	0.188
	CNS0095595	Whole white alabastrum(diploid) 2	0.395
	CNS0095596	Whole white alabastrum(diploid) 3	0.477
	CNS0095597	Whole white alabastrum(diploid) 4	0.419
	CNS0095598	Silvery flower (diploied) 1	1.059
	CNS0095599	Silvery flower (diploied) 2	0.558
	CNS0095600	Silvery flower (diploied) 3	0.149
	CNS0095601	Golden flower (diploid) 1	1.175
	CNS0095602	Golden flower (diploid) 2	0.183
	CNS0095603	Golden flower (diploid) 3	0.473
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.341
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.363
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.411
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.456
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.199
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.302
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	0.171
	CNS0095612	Silvery flower (tetraploid) 3	0.000
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.348
	CRR073298	Stem 2	0.420
	CRR073299	Stem 3	0.040
	CRR073300	Leaf 1	0.247
	CRR073301	Leaf 2	0.107
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.068
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.943
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000