Gene detail

Detail information of GWHGAAZE018011

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010101651.1	0	ADP,ATP carrier protein ER-ANT1 [Morus notabilis]
Swissprot	tr\|Q8LB08\|ADT4_ARATH	5E-177	ADP,ATP carrier protein ER-ANT1
trEMBL	tr\|W9RG10\|W9RG10_9ROSA	0	ADP,ATP carrier protein ER-ANT1 {ECO:0000313\|EMBL:EXB89120.1}
TAIR10	AT5G17400.1	5E-125	endoplasmic reticulum-adenine nucleotide transporter 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000005	gene	13618462	13620809	-
GWHAAZE00000005	mRNA	13618462	13620809	-
GWHAAZE00000005	exon	13618462	13618770	-
GWHAAZE00000005	exon	13618873	13619244	-
GWHAAZE00000005	exon	13620552	13620809	-
GWHAAZE00000005	CDS	13620552	13620809	-
GWHAAZE00000005	CDS	13618873	13619244	-
GWHAAZE00000005	CDS	13618462	13618770	-

Transcript Sequence
>GWHTAAZE018033 ATGGGGTCGCAATCGGAGAGATTTTCCGTTGATTTTATGATGGGAGGGGCCGCGGCTGTTGTAGCAAAGAGTGCGGCGGCGCCTATTGAGAGAGTGAAGCTTTTGTTGCAGAATCAAGGGGAGTTGTTAAAGAGAGGACAGCTCAAGAGACCTTATGTAGGTGTTGGGGATTGCTTTACAAGGGTCTTGAGAGAGGAAGGTGTATTGTCCCTTTGGAGAGGCAACCAAGCCAATGTCATTCGATATTTTCCAACCCAGGCTTTCAACTTCGCTTTTAAAGGTTACTTCAAGAATCTATTTGGACGGTCAAAAGAGAAAGACGGGTATGTGAAATGGTTTGCTGGAAATGTTGCTTCTGGGAGTGCTGCTGGAGCAACCACCTCATTGTTCCTCTATCACCTGGATTATGCACGGACCCGACTAGGAACTGATGCAAAGGAGTGCACGGTTAACGGCAAACATCAATATAGAGGGCTATTAGATGTTTACCGTTCAACATATTCAACTGATGGCATTAAAGGTCTTTATCGTGGATTTGGGGTTTCAATCATGGGAATTACTCTTTACAGAGGCATGTATTTTGGGATATATGACACCCTGAAACCTATTGTGTTGGTTGGACCTTTTCAGGGGAATTTCATTGCTAGTTTCTTGTTGGGTTGGAGCGTGACAACAGTTTCTGGGGTCTGTGCCTATCCCTTCGACACGTTGCGACGTAGAATGATGTTAACCTCTGGTCAACCGTTGAAATACCAGAATACCATGCACGCATTCTGTGAAATTATTCGCCTTGAGGGTTTTGGTGCACTCTATCGAGGCGTTACAGCAAATATGCTTCTTGGTGTAGCAGGAGCTGGAGTACTTGCTGGTTATGATCAGCTTTGCCGAATTGCATATAGACGTAGTCATAGTTTTGAGCCTCAGACGGCCTTGAAGTAA

Network for GWHGAAZE018011

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00153.28	Mito_carr	6	102	2.50E-21
PF00153.28	Mito_carr	112	203	2.50E-21
PF00153.28	Mito_carr	212	297	5.60E-15

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K05863	SLC25A4S, ANT	Calcium signaling pathway	map04020
		cGMP-PKG signaling pathway	map04022
		Necroptosis	map04217
		Cellular senescence	map04218

Gene Ontology

GO term	Ontology	Name
GO:0055085	biological_process	transmembrane transport
GO:0005743	cellular_component	mitochondrial inner membrane
GO:0022857	molecular_function	transmembrane transporter activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	6.875
	SRR3591706	second leaf	11.171
	SRR3591707	mature leaf	20.413
	SRR3591708	Shoot apex	12.679
	SRR3591709	Stem	18.453
	SRR3591710	White floral bud	37.022
	SRR3591711	White flower	13.860
	SRR3591712	Green floral bud	36.763
	SRR3591713	Yellow flower	12.329
SRP173429	SRR8316895	Juvenile bud stage	6.641
	SRR8316896	Juvenile bud stage	16.067
	SRR8316897	Juvenile bud stage	8.902
	SRR8316894	Third green stage	8.682
	SRR8316900	Third green stage	34.677
	SRR8316901	Third green stage	32.237
	SRR8316898	Complete white stage	7.308
	SRR8316899	Complete white stage	13.318
	SRR8316903	Complete white stage	8.490
	SRR8316902	Silver flowering stage	6.564
	SRR8316904	Silver flowering stage	10.766
	SRR8316905	Silver flowering stage	5.870
	SRR8316906	Gold flowering stage	22.457
	SRR8316907	Gold flowering stage	15.352
	SRR8316908	Gold flowering stage	17.404
SRP132670	SRR6706286	Control	20.508
	SRR6706287	Light intensity 50%	22.543
	SRR6706288	Light intensity 20%	19.465
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	35.097
	CNS0095593	Slightly white alabastrum(diploid) 2	27.560
	CNS0095594	Slightly white alabastrum(diploid) 3	43.423
	CNS0095595	Whole white alabastrum(diploid) 2	63.686
	CNS0095596	Whole white alabastrum(diploid) 3	78.651
	CNS0095597	Whole white alabastrum(diploid) 4	89.288
	CNS0095598	Silvery flower (diploied) 1	14.935
	CNS0095599	Silvery flower (diploied) 2	16.186
	CNS0095600	Silvery flower (diploied) 3	18.236
	CNS0095601	Golden flower (diploid) 1	22.777
	CNS0095602	Golden flower (diploid) 2	21.104
	CNS0095603	Golden flower (diploid) 3	22.016
	CNS0095604	Slightly white alabastrum(tetraploid) 1	55.827
	CNS0095605	Slightly white alabastrum(tetraploid) 2	69.891
	CNS0095606	Slightly white alabastrum(tetraploid) 3	9.930
	CNS0095607	Whole white alabastrum(tetraploid) 1	100.409
	CNS0095608	Whole white alabastrum(tetraploid) 2	107.528
	CNS0095609	Whole white alabastrum(tetraploid) 3	54.395
	CNS0095610	Silvery flower (tetraploid) 1	16.433
	CNS0095611	Silvery flower (tetraploid) 2	22.647
	CNS0095612	Silvery flower (tetraploid) 3	26.271
	CNS0095613	Golden flower (tetraploid) 1	14.168
	CNS0095614	Golden flower (tetraploid) 2	17.518
	CNS0095615	Golden flower (tetraploid) 3	30.305
CRA001975	CRR073297	Stem 1	18.519
	CRR073298	Stem 2	17.810
	CRR073299	Stem 3	17.408
	CRR073300	Leaf 1	29.302
	CRR073301	Leaf 2	21.355
	CRR073302	Leaf 3	13.702
	CRR073303	Juvenile bud 1	20.373
	CRR073304	Juvenile bud 2	18.480
	CRR073305	Juvenile bud 3	12.205
	CRR073306	Third green 1	13.236
	CRR073307	Third green 2	13.772
	CRR073308	Third green 3	10.765
	CRR073309	Second white 1	7.786
	CRR073310	Second white 2	10.329
	CRR073311	Second white 3	6.626
	CRR073312	Silver flowering 1	9.503
	CRR073313	Silver flowering 2	9.118
	CRR073314	Silver flowering 3	11.715
	CRR073315	Gold flowering 1	19.409
	CRR073316	Gold flowering 2	21.638
	CRR073317	Gold flowering 3	16.706
	CRR073318	Tawny withering 1	16.509
	CRR073319	Tawny withering 2	13.080
	CRR073320	Tawny withering 3	13.491